RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 UBE3CQ15386 1083 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 MUM1L1Q5H9M0 696 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 TMEM240Q5SV17 173 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 UBXN11Q5T124 520 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 ZBTB46Q86UZ6 589 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 GLB1L3Q8NCI6 653 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 SSBP3Q9BWW4 388 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 ADAM7Q9H2U9 754 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 PPP4R1LQ9P1A2 415 aa5.12□□□□□ -1.59
HMGB1P11-201ENST00000413899 E2F8A0AVK6 867 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 TOX4O94842 621 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 CTSSP25774 331 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 WASP42768 502 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 RECQLP46063 649 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 CLUL1Q15846 466 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 SNX33Q8WV41 574 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 TEKT5Q96M29 485 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 CAMKK2Q96RR4 588 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 RBM15Q96T37 977 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 GPHA2Q96T91 129 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 NELFAQ9H3P2 528 aa5.11□□□□□ -1.59
HMGB1P11-201ENST00000413899 NDUFS2O75306 463 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 S100BP04271 92 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 C5AR1P21730 350 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 RPS19P39019 145 aaKnown RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 MCAMP43121 646 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 PPP3CAQ08209 521 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 SAFB2Q14151 953 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 ACAP2Q15057 778 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 MST1LQ2TV78 715 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 ODR4Q5SWX8 454 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 EFCAB2Q5VUJ9 269 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 FAM180AQ6UWF9 173 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 ADGRE4PQ86SQ3 457 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 PNMA8AQ86V59 439 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 GPR135Q8IZ08 494 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 RPTORQ8N122 1335 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 MSL3Q8N5Y2 521 aaKnown RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 ANKRD53Q8N9V6 530 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 GPR156Q8NFN8 814 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 CXorf38Q8TB03 319 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 HOXB13Q92826 284 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 HOOK2Q96ED9 719 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 C20orf173Q96LM9 149 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 PTPN18Q99952 460 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 DPYSL5Q9BPU6 564 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 ENKD1Q9H0I2 346 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 AGO3Q9H9G7 860 aaKnown RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 RBM12Q9NTZ6 932 aaKnown RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 TUBD1Q9UJT1 453 aa5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 CNOT11Q9UKZ1 510 aaKnown RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 THRAP3Q9Y2W1 955 aaKnown RBP5.1□□□□□ -1.59
HMGB1P11-201ENST00000413899 ZNF536O15090 1300 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 NPEPPSL1A6NEC2 478 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 NRP1O14786 923 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 XPOTO43592 962 aaKnown RBP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 CDC14BO60729 498 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 PHF2O75151 1096 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ABLIM3O94929 683 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 SNUPNO95149 360 aaKnown RBP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 GASTP01350 101 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ITGB3P05106 788 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 CCND1P24385 295 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ADKP55263 362 aaKnown RBP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 CCT2P78371 535 aaKnown RBP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 MGAT2Q10469 447 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 PIN1Q13526 163 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 RIN1Q13671 783 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 NFIXQ14938 502 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ODF1Q14990 250 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ABHD15Q6UXT9 468 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 TAX1BP1Q86VP1 789 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 CMTR2Q8IYT2 770 aaKnown RBP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 CPA6Q8N4T0 437 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 SHCBP1Q8NEM2 672 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 RIN2Q8WYP3 895 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 SLC2A13Q96QE2 648 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 LRRC37BQ96QE4 947 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ADI1Q9BV57 179 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 IL23AQ9NPF7 189 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 ING3Q9NXR8 418 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 SLC30A1Q9Y6M5 507 aa5.09□□□□□ -1.59
HMGB1P11-201ENST00000413899 GPR42O15529 346 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 RAD17O75943 681 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 ZRANB2O95218 330 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 GYPEP15421 78 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 CRHR1P34998 444 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 ACAP1Q15027 740 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 KRT40Q6A162 431 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 TCTN3Q6NUS6 607 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 CIR1Q86X95 450 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 CMTM4Q8IZR5 234 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 THEMISQ8N1K5 641 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 DNERQ8NFT8 737 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 ZNF480Q8WV37 535 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 BORCS6Q96GS4 357 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 RPL10LQ96L21 214 aaKnown RBP5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 PLA2G12BQ9BX93 195 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms