RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NDST4Q9H3R1 872 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 TMEM134Q9H6X4 195 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 METTL14Q9HCE5 456 aaKnown RBP7.28□□□□□ -1.24
VPS41-204ENST00000413141 SETD4Q9NVD3 440 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 HSPBP1Q9NZL4 362 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 ARMCX3Q9UH62 379 aaPredicted RBP7.28□□□□□ -1.24
VPS41-204ENST00000413141 DDX20Q9UHI6 824 aaKnown RBP7.28□□□□□ -1.24
VPS41-204ENST00000413141 AKT3Q9Y243 479 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 TRIM17Q9Y577 477 aa7.28□□□□□ -1.24
VPS41-204ENST00000413141 SMIM35A0A1B0GVV1 85 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 C17orf102A2RUQ5 167 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 ANKRD63C9JTQ0 380 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 K7ERI5 159 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PES1O00541 588 aaKnown RBP7.27□□□□□ -1.25
VPS41-204ENST00000413141 MAPK13O15264 365 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 ASAP2O43150 1006 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 ZEB2O60315 1214 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 EXOC3O60645 756 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 MSCO60682 206 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 VTNP04004 478 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PRKCBP05771 671 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 SRGAP2CP0DJJ0 459 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 GARTP22102 1010 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 ADSSP30520 456 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PSMC2P35998 433 aaKnown RBP7.27□□□□□ -1.25
VPS41-204ENST00000413141 PHKA2P46019 1235 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 LIG4P49917 911 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 GSDMDP57764 484 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 CHMP4BP1P59074 171 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PTENP60484 403 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 ADAM17P78536 824 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 UBXN1Q04323 297 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 MBTD1Q05BQ5 628 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PPP2R3AQ06190 1150 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 POU5F1BQ06416 359 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 TBX2Q13207 712 aaPredicted RBP7.27□□□□□ -1.25
VPS41-204ENST00000413141 HIC1Q14526 733 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 DCAF17Q5H9S7 520 aaPredicted RBP7.27□□□□□ -1.25
VPS41-204ENST00000413141 FKBP15Q5T1M5 1219 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 CCSAPQ6IQ19 270 aaPredicted RBP7.27□□□□□ -1.25
VPS41-204ENST00000413141 CXCL17Q6UXB2 119 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 RUFY4Q6ZNE9 571 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 CCDC186Q7Z3E2 898 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 IFNLR1Q8IU57 520 aaPredicted RBP7.27□□□□□ -1.25
VPS41-204ENST00000413141 XXYLT1Q8NBI6 393 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 CCDC150Q8NCX0 1101 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 KLHDC9Q8NEP7 349 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PPP1R13LQ8WUF5 828 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 SLC35C1Q96A29 364 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 BORCS6Q96GS4 357 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 ERGIC2Q96RQ1 377 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PCIF1Q9H4Z3 704 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 WBP1LQ9NX94 342 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 FRMD4BQ9Y2L6 1034 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS41-204ENST00000413141 STYXL1Q9Y6J8 313 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 PCNTO95613 3336 aa7.27□□□□□ -1.25
VPS41-204ENST00000413141 A0A087WZ62 844 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 INO80B-WBP1J3KQ70 363 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 TREHO43280 583 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 GYPCP04921 128 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 ASGR1P07306 291 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 ADRB2P07550 413 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 CYP2C9P11712 490 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 GPC3P51654 580 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 BFSP1Q12934 665 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 TRIM14Q14142 442 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 ARID5BQ14865 1188 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 SYCP1Q15431 976 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 KCNA10Q16322 511 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 MAPK6Q16659 721 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 ZPBP2Q6X784 338 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 INTS8Q75QN2 995 aaKnown RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 RNF180Q86T96 592 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 ZNF410Q86VK4 478 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 KIAA0319LQ8IZA0 1049 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 C7orf31Q8N865 590 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 PCSK9Q8NBP7 692 aaKnown RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 ZSWIM2Q8NEG5 633 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 NLRP7Q8WX94 980 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 POMGNT1Q8WZA1 660 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 SAAL1Q96ER3 474 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 ZNF668Q96K58 619 aaPredicted RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 FBXL18Q96ME1 805 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 FDXACB1Q9BRP7 624 aaPredicted RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 TARS2Q9BW92 718 aaKnown RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 MRPL4Q9BYD3 311 aaKnown RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 INO80BQ9C086 356 aaPredicted RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 FAM49AQ9H0Q0 323 aaPredicted RBP7.26□□□□□ -1.25
VPS41-204ENST00000413141 KCNF1Q9H3M0 494 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 FZD8Q9H461 694 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 MINDY3Q9H8M7 445 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 IFT122Q9HBG6 1241 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 ANKFY1Q9P2R3 1169 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 HDAC6Q9UBN7 1215 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 GTF2IRD1Q9UHL9 959 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 USP20Q9Y2K6 914 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 PTPN22Q9Y2R2 807 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms