RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 K7ERI5 159 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 SLC16A4O15374 487 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 TRAK2O60296 914 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 PRKCBP05771 671 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 GAP43P17677 238 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 ARF4P18085 180 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 NPAS4Q8IUM7 802 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 STAMQ92783 540 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 FIZ1Q96SL8 496 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 ELAC1Q9H777 363 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 SEL1LQ9UBV2 794 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 PCDHA11Q9Y5I1 949 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 B4GALT5O43286 388 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 ZNF623O75123 536 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 STAG3L1P0CL83 205 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 ABCD1P33897 745 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 HTRA4P83105 476 aaPredicted RBP17■□□□□ 0.31
TRAPPC12-203ENST00000411973 RAB30Q15771 203 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 UBXN11Q5T124 520 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 TWF2Q6IBS0 349 aaKnown RBP17■□□□□ 0.31
TRAPPC12-203ENST00000411973 TAS1R3Q7RTX0 852 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 TMCO2Q7Z6W1 182 aaPredicted RBP17■□□□□ 0.31
TRAPPC12-203ENST00000411973 FMR1NBQ8N0W7 255 aaPredicted RBP17■□□□□ 0.31
TRAPPC12-203ENST00000411973 PAGE5Q96GU1 130 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 RAD9AQ99638 391 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 PBX4Q9BYU1 374 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 ST6GALNAC4Q9H4F1 302 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 ZHX3Q9H4I2 956 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 TMEM161AQ9NX61 479 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 INSL6Q9Y581 213 aa17■□□□□ 0.31
TRAPPC12-203ENST00000411973 SOX1O00570 391 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 ZNF202O95125 648 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 EOMESO95936 686 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 EDN1P05305 212 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 MYL1P05976 194 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 SKIP12755 728 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 RAB27AP51159 221 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 FAM160A1Q05DH4 1040 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 PRPF4BQ13523 1007 aaKnown RBP16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 HAUS6Q7Z4H7 955 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 SFR1Q86XK3 245 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 ECHDC2Q86YB7 292 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 FAM178BQ8IXR5 827 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 ENGASEQ8NFI3 743 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 RC3H2Q9HBD1 1191 aaKnown RBP16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 OLFML3Q9NRN5 406 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 PANK4Q9NVE7 773 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 MSRAQ9UJ68 235 aa16.99■□□□□ 0.31
TRAPPC12-203ENST00000411973 COL4A6Q14031 1691 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 TTLL13PA6NNM8 815 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 TLL1O43897 1013 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 DGKIO75912 1065 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 UPP2O95045 317 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 IDEP14735 1019 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 PBX2P40425 430 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 AFMP43652 599 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 RABGGTBP53611 331 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 GPR153Q6NV75 609 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 FAM117BQ6P1L5 589 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 SLC27A1Q6PCB7 646 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 KRBA2Q6ZNG9 492 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 ZNF720Q7Z2F6 126 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 MRPL10Q7Z7H8 261 aaKnown RBP16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 CCDC65Q8IXS2 484 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 ZNF689Q96CS4 500 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 CPB2Q96IY4 423 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 MRPL4Q9BYD3 311 aaKnown RBP16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 PCDHB7Q9Y5E2 793 aa16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 FNDC1Q4ZHG4 1894 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC12-203ENST00000411973 SZT2Q5T011 3432 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 PVALEFA0A1B0GWK0 134 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 K7ENM7 598 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 N4BP3O15049 544 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 GADD45BO75293 160 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 ATF7P17544 494 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 LIG1P18858 919 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 DNAJB2P25686 324 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 NMT1P30419 496 aaKnown RBP16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 ASIC1P78348 528 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 GTF2BQ00403 316 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 EHHADHQ08426 723 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 STRN3Q13033 797 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 CUL4BQ13620 913 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 HERC4Q5GLZ8 1057 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 UNC13DQ70J99 1090 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 LRCH3Q96II8 777 aa16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 ACO2Q99798 780 aaKnown RBP16.97■□□□□ 0.31
TRAPPC12-203ENST00000411973 STRA6Q9BX79 667 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms