RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 TMEM60Q9H2L4 133 aa18.43■□□□□ 0.54
SCAMP4-203ENST00000411971 SMOC2Q9H3U7 446 aa18.43■□□□□ 0.54
SCAMP4-203ENST00000411971 F8W810 466 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 RFC5P40937 340 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 NHLH1Q02575 133 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 AMHR2Q16671 573 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 GLB1LQ6UWU2 654 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 SRGAP1Q7Z6B7 1085 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 DDX53Q86TM3 631 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 ALYREFQ86V81 257 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 PRSS33Q8NF86 280 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 TMEM169Q96HH4 297 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 CPB2Q96IY4 423 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 PHOX2BQ99453 314 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 JPH2Q9BR39 696 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 ZSWIM4Q9H7M6 989 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 MIOSQ9NXC5 875 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 HES2Q9Y543 173 aa18.42■□□□□ 0.54
SCAMP4-203ENST00000411971 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 C2CD4DB7Z1M9 353 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 TSPAN1O60635 241 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 PDGFBP01127 241 aaPredicted RBP18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 POMCP01189 267 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 CTSAP10619 480 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 XBP1P17861 261 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 CA8P35219 290 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 RAB27AP51159 221 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 PTPN14Q15678 1187 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 TAS1R1Q7RTX1 841 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 DIS3L2Q8IYB7 885 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 MTMR9Q96QG7 549 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 PPP4R2Q9NY27 417 aa18.41■□□□□ 0.54
SCAMP4-203ENST00000411971 POTEMA6NI47 508 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 MARCH6O60337 910 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 HOXB8P17481 243 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 NEK4P51957 841 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 PTENP60484 403 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 GUCY1B3Q02153 619 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 CAPSQ13938 189 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 RARS2Q5T160 578 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 BMP8AQ7Z5Y6 402 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 CDR2LQ86X02 465 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 SLFN12Q8IYM2 578 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 PIGOQ8TEQ8 1089 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 CASP10Q92851 521 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 MTRQ99707 1265 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 ADAM7Q9H2U9 754 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 TTC12Q9H892 705 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 RSAD1Q9HA92 442 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 MARCH5Q9NX47 278 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 IPPQ9Y573 584 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 IRAK3Q9Y616 596 aa18.4■□□□□ 0.54
SCAMP4-203ENST00000411971 DOCK6Q96HP0 2047 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 FSD2A1L4K1 749 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 B4GALT5O43286 388 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 DKC1O60832 514 aaKnown RBP eCLIP18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 LILRB3O75022 631 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 LYPLA2O95372 231 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 SSBP05455 408 aaKnown RBP eCLIP18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 SPATA31C1P0DKV0 1188 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 SKIP12755 728 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 GLRA2P23416 452 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 ARL2P36404 184 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 TXKP42681 527 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 VCPP55072 806 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 RNASELQ05823 741 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 MBTD1Q05BQ5 628 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 ANKRD1Q15327 319 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 CALCRLQ16602 461 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 PTPN21Q16825 1174 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 PBXIP1Q96AQ6 731 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 ZFP42Q96MM3 310 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 GPRC5CQ9NQ84 441 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 PCDHA12Q9UN75 941 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 PPME1Q9Y570 386 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 USP34Q70CQ2 3546 aa18.39■□□□□ 0.53
SCAMP4-203ENST00000411971 TTLL13PA6NNM8 815 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 NRP1O14786 923 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 EFEMP2O95967 443 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 RARRES1P49788 294 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 OTUD6AQ7L8S5 288 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 COLGALT2Q8IYK4 626 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 TCP11Q8WWU5 503 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 WASF1Q92558 559 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 PGBD4Q96DM1 585 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 KLHL5Q96PQ7 755 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 GAD1Q99259 594 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 NAP1L4Q99733 375 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 TRIP11Q15643 1979 aa18.38■□□□□ 0.53
SCAMP4-203ENST00000411971 MTCL1Q9Y4B5 1905 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-203ENST00000411971 NEMFO60524 1076 aa18.37■□□□□ 0.53
SCAMP4-203ENST00000411971 BAG4O95429 457 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-203ENST00000411971 NEFLP07196 543 aa18.37■□□□□ 0.53
SCAMP4-203ENST00000411971 CNPP09543 421 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-203ENST00000411971 SRGAP2BP0DMP2 458 aa18.37■□□□□ 0.53
SCAMP4-203ENST00000411971 ARF4P18085 180 aaPredicted RBP18.37■□□□□ 0.53
SCAMP4-203ENST00000411971 MLH1P40692 756 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms