RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 BOCQ9BWV1 1114 aa2.43□□□□□ -2.02
RNU4-43P-201ENST00000410628 POFUT1Q9H488 388 aa2.43□□□□□ -2.02
RNU4-43P-201ENST00000410628 MTG2Q9H4K7 406 aa2.43□□□□□ -2.02
RNU4-43P-201ENST00000410628 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.43□□□□□ -2.02
RNU4-43P-201ENST00000410628 TNPO3Q9Y5L0 923 aaKnown RBP2.43□□□□□ -2.02
RNU4-43P-201ENST00000410628 LCHNA4D1U4 455 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 FAM221BA6H8Z2 402 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 TMEM200CA6NKL6 621 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 DNAJC6O75061 913 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ALDH1A2O94788 518 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 PCDH8O95206 1070 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 MATN4O95460 622 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 GAAP10253 952 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 TCF3P15923 654 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 NAT1P18440 290 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ABCG1P45844 678 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 MECP2P51608 486 aaKnown RBP2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 CD69Q07108 199 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 RASGRF1Q13972 1273 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 BEAN1Q3B7T3 259 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 PDCD4Q53EL6 469 aaKnown RBP2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ESRP1Q6NXG1 681 aaKnown RBP2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ARHGEF19Q8IW93 802 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 MSL3Q8N5Y2 521 aaKnown RBP2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 KIAA1958Q8N8K9 716 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ZNF384Q8TF68 577 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 RTF1Q92541 710 aaKnown RBP2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 C16orf92Q96LL3 132 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 SPATA5L1Q9BVQ7 753 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 SLC46A2Q9BY10 475 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ENKD1Q9H0I2 346 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 PCIF1Q9H4Z3 704 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 SPON1Q9HCB6 807 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ALG13Q9NP73 1137 aaKnown RBP2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 CHST2Q9Y4C5 530 aa2.42□□□□□ -2.02
RNU4-43P-201ENST00000410628 ARHGEF17Q96PE2 2063 aaPredicted RBP2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 ZMYM3Q14202 1370 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 PTPDC1A2A3K4 754 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 LRRC3CA6NJW4 275 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 RNASET2O00584 256 aaKnown RBP2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 OPHN1O60890 802 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 SPDEFO95238 335 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 ITGAMP11215 1152 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 ADCY2Q08462 1091 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 ZNF460Q14592 562 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 BTNL9Q6UXG8 535 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 OTOP1Q7RTM1 612 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 BMP8AQ7Z5Y6 402 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 LINC00476Q8WZB0 136 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 PHACTR3Q96KR7 559 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 NEU1Q99519 415 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 ELF4Q99607 663 aaPredicted RBP2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 NOL10Q9BSC4 688 aaKnown RBP2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 SLC29A3Q9BZD2 475 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 KIAA1586Q9HCI6 787 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 TRIM39Q9HCM9 518 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 PODXL2Q9NZ53 605 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 H2AFY2Q9P0M6 372 aaPredicted RBP2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 SAMD15Q9P1V8 674 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 DKK2Q9UBU2 259 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 PPP1R1BQ9UD71 204 aaPredicted RBP2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 HDAC5Q9UQL6 1122 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 INSL6Q9Y581 213 aa2.41□□□□□ -2.02
RNU4-43P-201ENST00000410628 COL3A1P02461 1466 aaPredicted RBP2.4□□□□□ -2.02
RNU4-43P-201ENST00000410628 A0A0A6YYJ9 748 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 DNAJC9-AS1A6NH13 148 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 ELL2O00472 640 aaPredicted RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 STK10O94804 968 aaKnown RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 PRPF6O94906 941 aaKnown RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 RAPGEF3O95398 923 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 IGLV2-14P01704 120 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 HKR1P10072 659 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 ZSCAN20P17040 1043 aaPredicted RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 CANXP27824 592 aaKnown RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 MPLP40238 635 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 FNTBP49356 437 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 GUCY1B3Q02153 619 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 FOXF2Q12947 444 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 RESTQ13127 1097 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 MRPL49Q13405 166 aaKnown RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 FAM83AQ86UY5 434 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 OR10H5Q8NGA6 315 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 RPGRQ92834 1020 aaKnown RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 FERMT2Q96AC1 680 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 E2F7Q96AV8 911 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 ZNF669Q96BR6 464 aaPredicted RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 IL17RAQ96F46 866 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 CLUHP3Q96NS8 147 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 GMLQ99445 158 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 FDXACB1Q9BRP7 624 aaPredicted RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 PITHD1Q9GZP4 211 aaPredicted RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 MS4A5Q9H3V2 200 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 ACSS2Q9NR19 701 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 IL17RBQ9NRM6 502 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 USP18Q9UMW8 372 aa2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 USP15Q9Y4E8 981 aaPredicted RBP2.4□□□□□ -2.03
RNU4-43P-201ENST00000410628 PIPSLA2A3N6 862 aa2.39□□□□□ -2.03
RNU4-43P-201ENST00000410628 RBMXL2O75526 392 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms