RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 DCTN3O75935 186 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 KRT36O76013 467 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ATG7O95352 703 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CHEK2O96017 543 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 POU2F2P09086 479 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 DNAJB1P25685 340 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ARL3P36405 182 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SPAM1P38567 509 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 RAB27AP51159 221 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ABATP80404 500 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ERCC6LQ2NKX8 1250 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PACS1Q6VY07 963 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PACS2Q86VP3 889 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 KLHL7Q8IXQ5 586 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 DIS3L2Q8IYB7 885 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 C3orf58Q8NDZ4 430 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NPLOC4Q8TAT6 608 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NACC2Q96BF6 587 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TRIM43Q96BQ3 446 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CHAMP1Q96JM3 812 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SSX3Q99909 188 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 MRPS26Q9BYN8 205 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TBC1D22BQ9NU19 505 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 POLR3BQ9NW08 1133 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CUEDC1Q9NWM3 386 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 RMND1Q9NWS8 449 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 DAPK2Q9UIK4 370 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 AP3M1Q9Y2T2 418 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CCDC154A6NI56 674 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 VWA5AO00534 786 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ATP9AO75110 1047 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PPP1R37O75864 691 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ECDO95905 644 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PAHP00439 452 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TNNC2P02585 160 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SERPINB6P35237 376 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 STARP49675 285 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 RCAN1P53805 252 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 GSCP56915 257 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CARD18P57730 90 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ILF2Q12905 390 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 STK4Q13043 487 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 MTMR3Q13615 1198 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM76BQ5HYJ3 339 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PDPK2PQ6A1A2 396 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 LAYNQ6UX15 382 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 RUFY4Q6ZNE9 571 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CHD1LQ86WJ1 897 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CNTROBQ8N137 903 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 KIAA1586Q9HCI6 787 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TRPM5Q9NZQ8 1165 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CIDEBQ9UHD4 219 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 KLHL20Q9Y2M5 609 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SYNJ1O43426 1573 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FRMPD2Q68DX3 1309 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 RRN3P2A6NIE6 340 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 KPNA3O00505 521 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 DEAF1O75398 565 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 IGHDP01880 384 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 XPAP23025 273 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 G0S2P27469 103 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 LIMK1P53667 647 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TRAP1Q12931 704 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NR5A1Q13285 461 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 BMPR2Q13873 1038 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SMCO1Q147U7 214 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CLCA4Q14CN2 919 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ARMCX4Q5H9R4 360 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 MIB1Q86YT6 1006 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 CAMK1DQ8IU85 385 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 KSR1Q8IVT5 923 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 KIRREL3Q8IZU9 778 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 USHBP1Q8N6Y0 703 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ST7LQ8TDW4 575 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PPP2R3CQ969Q6 453 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TIFAQ96CG3 184 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 MTERF3Q96E29 417 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TCEANC2Q96MN5 208 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 MOGAT1Q96PD6 335 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NOX5Q96PH1 765 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TBCDQ9BTW9 1192 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SENP6Q9GZR1 1112 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TRPV5Q9NQA5 729 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SAGE1Q9NXZ1 904 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NKIRAS1Q9NYS0 192 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ZSWIM5Q9P217 1185 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 RABGEF1Q9UJ41 708 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 GGA2Q9UJY4 613 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FBXO10Q9UK96 956 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ADAM21Q9UKJ8 722 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 APOBEC2Q9Y235 224 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 A0A0B4J203 849 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 E2F8A0AVK6 867 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TMEM247A6NEH6 219 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM25AB3EWG3 89 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM25CB3EWG5 89 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM25GB3EWG6 89 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 APAF1O14727 1248 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PHF2O75151 1096 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms