RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 VPS52Q8N1B4 723 aa16.42■□□□□ 0.22
CBX3-203ENST00000409747 IGSF21Q96ID5 467 aa16.42■□□□□ 0.22
CBX3-203ENST00000409747 ZBP1Q9H171 429 aa16.42■□□□□ 0.22
CBX3-203ENST00000409747 NRDE2Q9H7Z3 1164 aa16.42■□□□□ 0.22
CBX3-203ENST00000409747 MINDY3Q9H8M7 445 aa16.42■□□□□ 0.22
CBX3-203ENST00000409747 RSAD1Q9HA92 442 aa16.42■□□□□ 0.22
CBX3-203ENST00000409747 HOXA11P31270 313 aaPredicted RBP16.41■□□□□ 0.22
CBX3-203ENST00000409747 ORC2Q13416 577 aaPredicted RBP16.41■□□□□ 0.22
CBX3-203ENST00000409747 NOTUMQ6P988 496 aa16.41■□□□□ 0.22
CBX3-203ENST00000409747 FAM193BQ96PV7 902 aaPredicted RBP16.41■□□□□ 0.22
CBX3-203ENST00000409747 MTMR9Q96QG7 549 aa16.41■□□□□ 0.22
CBX3-203ENST00000409747 LLPHQ9BRT6 129 aaKnown RBP16.41■□□□□ 0.22
CBX3-203ENST00000409747 S1PR5Q9H228 398 aa16.41■□□□□ 0.22
CBX3-203ENST00000409747 XPNPEP1Q9NQW7 623 aa16.41■□□□□ 0.22
CBX3-203ENST00000409747 HCFC2Q9Y5Z7 792 aa16.41■□□□□ 0.22
CBX3-203ENST00000409747 IRAK3Q9Y616 596 aa16.41■□□□□ 0.22
CBX3-203ENST00000409747 TRIOO75962 3097 aa16.41■□□□□ 0.22
CBX3-203ENST00000409747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.4■□□□□ 0.22
CBX3-203ENST00000409747 MEIS3P2A8K0S8 358 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 ZBTB39O15060 712 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 CXCL14O95715 111 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 GALTP07902 379 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 XRCC6P12956 609 aaKnown RBP eCLIP16.4■□□□□ 0.22
CBX3-203ENST00000409747 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
CBX3-203ENST00000409747 PTENP60484 403 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 CES5AQ6NT32 575 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 SYCE2Q6PIF2 218 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 AGMOQ6ZNB7 445 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 IFNLR1Q8IU57 520 aaPredicted RBP16.4■□□□□ 0.22
CBX3-203ENST00000409747 HACE1Q8IYU2 909 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 EDAQ92838 391 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 RPGRIP1Q96KN7 1286 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 TMEM175Q9BSA9 504 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 DZANK1Q9NVP4 752 aa16.4■□□□□ 0.22
CBX3-203ENST00000409747 INO80B-WBP1J3KQ70 363 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 TSPAN1O60635 241 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 CLASP2O75122 1294 aaKnown RBP16.39■□□□□ 0.21
CBX3-203ENST00000409747 CTSAP10619 480 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 RARRES1P49788 294 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 HMGN5P82970 282 aaKnown RBP16.39■□□□□ 0.21
CBX3-203ENST00000409747 ITIH3Q06033 890 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 UBXN11Q5T124 520 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 TMEM173Q86WV6 379 aaPredicted RBP16.39■□□□□ 0.21
CBX3-203ENST00000409747 NECTIN4Q96NY8 510 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 NFKBIZQ9BYH8 718 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 ITGA4P13612 1032 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 MCM7P33993 719 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 SLC11A1P49279 550 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 ST3GAL1Q11201 340 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 CCDC83Q8IWF9 413 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 ZSCAN31Q96LW9 406 aaPredicted RBP16.39■□□□□ 0.21
CBX3-203ENST00000409747 MFSD14AQ96MC6 490 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 KCNH6Q9H252 994 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 TUFT1Q9NNX1 390 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 DNAJB4Q9UDY4 337 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 NR2E1Q9Y466 385 aa16.39■□□□□ 0.21
CBX3-203ENST00000409747 POTEMA6NI47 508 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 WNT7AO00755 349 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 SEC24BO95487 1268 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 ALDH2P05091 517 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 CENPBP07199 599 aaPredicted RBP16.38■□□□□ 0.21
CBX3-203ENST00000409747 ARL2P36404 184 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 CAPSQ13938 189 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 PPFIBP1Q86W92 1011 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 ZNF280BQ86YH2 543 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 MCPH1Q8NEM0 835 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 ERMNQ8TAM6 284 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 TRIM6Q9C030 488 aaPredicted RBP16.38■□□□□ 0.21
CBX3-203ENST00000409747 CSRNP2Q9H175 543 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 ADAM7Q9H2U9 754 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 FOXP1Q9H334 677 aaPredicted RBP16.38■□□□□ 0.21
CBX3-203ENST00000409747 SH2B1Q9NRF2 756 aaPredicted RBP16.38■□□□□ 0.21
CBX3-203ENST00000409747 IPPQ9Y573 584 aa16.38■□□□□ 0.21
CBX3-203ENST00000409747 ATP2B1P20020 1258 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 GUCY1B3Q02153 619 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 MBTD1Q05BQ5 628 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 GNL2Q13823 731 aaKnown RBP16.37■□□□□ 0.21
CBX3-203ENST00000409747 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 ASAP3Q8TDY4 903 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 PIGOQ8TEQ8 1089 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 RIPOR3Q96MK2 946 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 APOL5Q9BWW9 433 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 EMILIN2Q9BXX0 1053 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 POLR3FQ9H1D9 316 aaPredicted RBP16.37■□□□□ 0.21
CBX3-203ENST00000409747 TMEM60Q9H2L4 133 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 FAN1Q9Y2M0 1017 aa16.37■□□□□ 0.21
CBX3-203ENST00000409747 INPPL1O15357 1258 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 DDHD2O94830 711 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 OR52Z1P0C646 297 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 MTHFRP42898 656 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 RBM25P49756 843 aaKnown RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 HFE2Q6ZVN8 426 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 SMG8Q8ND04 991 aaKnown RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 BCL7CQ8WUZ0 217 aaPredicted RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 NACC1Q96RE7 527 aa16.36■□□□□ 0.21
CBX3-203ENST00000409747 DBR1Q9UK59 544 aaKnown RBP16.36■□□□□ 0.21
CBX3-203ENST00000409747 ZMYM2Q9UBW7 1377 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms