RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 UBQLN1Q9UMX0 589 aaKnown RBP10.86□□□□□ -0.67
POLR1A-203ENST00000409681 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 PQBP1O60828 265 aaKnown RBP10.86□□□□□ -0.67
POLR1A-203ENST00000409681 COBLO75128 1261 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 ATP5DP30049 168 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 MAN1A1P33908 653 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 PRCPP42785 496 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 EFCAB13Q8IY85 973 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 IFT81Q8WYA0 676 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 YME1L1Q96TA2 773 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
POLR1A-203ENST00000409681 AGAP1Q9UPQ3 857 aa10.86□□□□□ -0.67
POLR1A-203ENST00000409681 FDPSP14324 419 aaKnown RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CDC25BP30305 580 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CASP14P31944 242 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 ITIH3Q06033 890 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 KCNH2Q12809 1159 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 NOL9Q5SY16 702 aaKnown RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 SHC4Q6S5L8 630 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 TMEM270Q6UE05 265 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CATSPER3Q86XQ3 398 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CCDC170Q8IYT3 715 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 RAB17Q9H0T7 212 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 OR1G1P47890 313 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 SGSM1Q2NKQ1 1148 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 RYBPQ8N488 228 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 MSL3Q8N5Y2 521 aaKnown RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 FAM133AQ8N9E0 248 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CEP72Q9P209 647 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 KANSL3Q9P2N6 904 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 AMHP03971 560 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 NNMTP40261 264 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 EVCP57679 992 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CYP27A1Q02318 531 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 BTNL9Q6UXG8 535 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 SYT2Q8N9I0 419 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 PDGFDQ9GZP0 370 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 HYOU1Q9Y4L1 999 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 PCDHAC2Q9Y5I4 1007 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 COL16A1Q07092 1604 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 APLP1P51693 650 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 GRIK4Q16099 956 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 SGO2Q562F6 1265 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 RFX6Q8HWS3 928 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 IL25Q9H293 177 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 ARFGAP3Q9NP61 516 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 SAMSN1Q9NSI8 373 aaKnown RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 BTBD19C9JJ37 291 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 NPTXRO95502 500 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 TERF1P54274 439 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 ELAVL2Q12926 359 aaKnown RBP10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CASC4Q6P4E1 433 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 IFT20Q8IY31 132 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 BBOF1Q8ND07 529 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CYP39A1Q9NYL5 469 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 TAF6LQ9Y6J9 622 aa10.85□□□□□ -0.67
POLR1A-203ENST00000409681 CYP2C19P33261 490 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 NPEPPSP55786 919 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 ZNF449Q6P9G9 518 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 C4orf50Q6ZRC1 276 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 SENP7Q9BQF6 1050 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 POLD4Q9HCU8 107 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 DBR1Q9UK59 544 aaKnown RBP10.84□□□□□ -0.67
POLR1A-203ENST00000409681 F8W8V4 182 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 EXTL3O43909 919 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 TCP1P17987 556 aaKnown RBP10.84□□□□□ -0.67
POLR1A-203ENST00000409681 MESDQ14696 234 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 KRT31Q15323 416 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 MAPRE1Q15691 268 aaKnown RBP10.84□□□□□ -0.67
POLR1A-203ENST00000409681 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 RUFY4Q6ZNE9 571 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 H7C0C1 242 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 ATP5OP48047 213 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 INTS2Q9H0H0 1204 aaKnown RBP10.84□□□□□ -0.67
POLR1A-203ENST00000409681 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
POLR1A-203ENST00000409681 PRRG1O14668 218 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 APOEP02649 317 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 GRK4P32298 578 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 CNTN2Q02246 1040 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 NFRKBQ6P4R8 1299 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 C11orf57Q6ZUT1 292 aaPredicted RBP10.84□□□□□ -0.67
POLR1A-203ENST00000409681 RHOT2Q8IXI1 618 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 REPS2Q8NFH8 660 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 AGXT2Q9BYV1 514 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 SEPT10Q9P0V9 454 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 PCDHB12Q9Y5F1 795 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 TBC1D8O95759 1140 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
POLR1A-203ENST00000409681 AXLP30530 894 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 SLC12A2P55011 1212 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 TMEM60Q9H2L4 133 aa10.84□□□□□ -0.67
POLR1A-203ENST00000409681 LGALS16A8MUM7 142 aa10.83□□□□□ -0.68
POLR1A-203ENST00000409681 M0QYV0 167 aa10.83□□□□□ -0.68
POLR1A-203ENST00000409681 CYP3A4P08684 503 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms