RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ARMCX3Q9UH62 379 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 GGT7Q9UJ14 662 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 SNX24Q9Y343 169 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 SIPA1L1O43166 1804 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 WNT10BO00744 389 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 OAS1P00973 400 aaKnown RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 PON1P27169 355 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 PRELPP51888 382 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 ZC3H3Q8IXZ2 948 aaKnown RBP16.65■□□□□ 0.26
LIMS2-205ENST00000409455 MTMR14Q8NCE2 650 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 GLG1Q92896 1179 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 CARD9Q9H257 536 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 STK38LQ9Y2H1 464 aa16.65■□□□□ 0.26
LIMS2-205ENST00000409455 GBP1P32455 592 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 SLCO1A2P46721 670 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 DRG2P55039 364 aaKnown RBP16.64■□□□□ 0.25
LIMS2-205ENST00000409455 ZNF543Q08ER8 600 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 MAPK7Q13164 816 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 CNGA2Q16280 664 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 ECM1Q16610 540 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 ABCB5Q2M3G0 1257 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 GALNTL6Q49A17 601 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 FRMD5Q7Z6J6 570 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 EPS8L3Q8TE67 593 aaKnown RBP16.64■□□□□ 0.25
LIMS2-205ENST00000409455 PLCD4Q9BRC7 762 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 PCDHA2Q9Y5H9 948 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 RPTORQ8N122 1335 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 RASGRF2O14827 1237 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 KRT16P08779 473 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 XRCC5P13010 732 aaKnown RBP16.64■□□□□ 0.25
LIMS2-205ENST00000409455 KRT13P13646 458 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 CDC25CP30307 473 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 MSH2P43246 934 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 BNIP1Q12981 228 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 TNIP1Q15025 636 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 ZDHHC24Q6UX98 284 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 TMEM179Q6ZVK1 233 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 ERICH1Q86X53 443 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 CDAN1Q8IWY9 1227 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 MKL1Q969V6 931 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 TMEM109Q9BVC6 243 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
LIMS2-205ENST00000409455 PARP2Q9UGN5 583 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 KDM3AQ9Y4C1 1321 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 BRCA1P38398 1863 aaKnown RBP16.64■□□□□ 0.25
LIMS2-205ENST00000409455 CNTNAP1P78357 1384 aa16.64■□□□□ 0.25
LIMS2-205ENST00000409455 DDX3XO00571 662 aaKnown RBP eCLIP16.63■□□□□ 0.25
LIMS2-205ENST00000409455 RAD21O60216 631 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 MARCH6O60337 910 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 COPB2P35606 906 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 GALCP54803 685 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 BIRC2Q13490 618 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-205ENST00000409455 ANKRD20A2Q5SQ80 823 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 ANKRD20A1Q5TYW2 823 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 DCAF12L1Q5VU92 463 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 ANKRD20A3Q5VUR7 823 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 DPY19L2P1Q6NXN4 242 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 KCTD1Q719H9 257 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 SPICE1Q8N0Z3 855 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 KIF2BQ8N4N8 673 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 RFFLQ8WZ73 363 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 TMEM39BQ9GZU3 492 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 SEMA4AQ9H3S1 761 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 MYOZ2Q9NPC6 264 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 OSGEPQ9NPF4 335 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 ARHGEF3Q9NR81 526 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 FER1L6Q2WGJ9 1857 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 O00370 1275 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 KIAA0391O15091 583 aaKnown RBP16.63■□□□□ 0.25
LIMS2-205ENST00000409455 DDX3YO15523 660 aaKnown RBP16.63■□□□□ 0.25
LIMS2-205ENST00000409455 GH2P01242 217 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 ADCY7P51828 1080 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 BLMHQ13867 455 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 RBM26Q5T8P6 1007 aaKnown RBP16.63■□□□□ 0.25
LIMS2-205ENST00000409455 AP1ARQ63HQ0 302 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 EGFL6Q8IUX8 553 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 ZBED3Q96IU2 234 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-205ENST00000409455 ERVK-5Q9HDB9 667 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 FGFR1OP2Q9NVK5 253 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 PPP1R9AQ9ULJ8 1098 aa16.63■□□□□ 0.25
LIMS2-205ENST00000409455 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
LIMS2-205ENST00000409455 EGFRP00533 1210 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 SLC16A2P36021 539 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-205ENST00000409455 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
LIMS2-205ENST00000409455 CTNNBL1Q8WYA6 563 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-205ENST00000409455 ZHX3Q9H4I2 956 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.62■□□□□ 0.25
LIMS2-205ENST00000409455 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
LIMS2-205ENST00000409455 A8MUI8 341 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 TCP11X1B4DZS4 312 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
LIMS2-205ENST00000409455 KRT18P05783 430 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms