RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 RAD51AP2Q09MP3 1159 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 PKP1Q13835 747 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 DHX8Q14562 1220 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 SKIV2LQ15477 1246 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 MAPK6Q16659 721 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 GLB1LQ6UWU2 654 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 LRRC55Q6ZSA7 311 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 USP49Q70CQ1 688 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 DAW1Q8N136 415 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 LRRC43Q8N309 656 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 KRI1Q8N9T8 703 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 KLHL23Q8NBE8 558 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 CNNM3Q8NE01 707 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 PRIMPOLQ96LW4 560 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 EIF2AQ9BY44 585 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 CWH43Q9H720 699 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 ALG13Q9NP73 1137 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 KCND2Q9NZV8 630 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 MORC2Q9Y6X9 1032 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 FNDC1Q4ZHG4 1894 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 NLRC5Q86WI3 1866 aa19.81■□□□□ 0.76
PDLIM2-206ENST00000409141 A0A1B0GUA9 196 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 MEIS3P2A8K0S8 358 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 FAM187BQ17R55 369 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 TMEM132AQ24JP5 1023 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 FOXD4L6Q3SYB3 417 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 FOXD4L3Q6VB84 417 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 COLGALT1Q8NBJ5 622 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 LINC00301Q8NCQ3 95 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 SYMPKQ92797 1274 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 KIFC3Q9BVG8 833 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 MRPL9Q9BYD2 267 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 TRIM6Q9C030 488 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 CCDC39Q9UFE4 941 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 PLAGL2Q9UPG8 496 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 INPP5FQ9Y2H2 1132 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 COL4A4P53420 1690 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 RALGAPA2Q2PPJ7 1873 aa19.8■□□□□ 0.76
PDLIM2-206ENST00000409141 SFI1A8K8P3 1242 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 OFD1O75665 1012 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 ITGB1P05556 798 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 PRKCBP05771 671 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 ITGA4P13612 1032 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 LAG3P18627 525 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 NCLP19338 710 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 NPTX2P47972 431 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 MAPK7Q13164 816 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 DMP1Q13316 513 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 PRPF4BQ13523 1007 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 BECN1Q14457 450 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 SLC27A1Q6PCB7 646 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 AGMOQ6ZNB7 445 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 CDR2LQ86X02 465 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 SMG8Q8ND04 991 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 LRRC15Q8TF66 581 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 RSPH1Q8WYR4 309 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 RAD54LQ92698 747 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 CCDC113Q9H0I3 377 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 C17orf75Q9HAS0 396 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 PRDM6Q9NQX0 595 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 BLOC1S4Q9NUP1 217 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 DAXXQ9UER7 740 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 IPPQ9Y573 584 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 NPHP3-ACAD11A0A0J9YXS1 232 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 K7ERI5 159 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 ACKR2O00590 384 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 SPTLC2O15270 562 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 TXLNAP40222 546 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 MCM6Q14566 821 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 ARSHQ5FYA8 562 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 NOMO2Q5JPE7 1267 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 GPBP1Q86WP2 473 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 THNSL1Q8IYQ7 743 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 LMAN2LQ9H0V9 348 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 RSAD1Q9HA92 442 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 UBN1Q9NPG3 1134 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 KMT5AQ9NQR1 393 aa19.79■□□□□ 0.76
PDLIM2-206ENST00000409141 CNTNAP2Q9UHC6 1331 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 NPTXRO95502 500 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 DDIT3P35638 169 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 CACNB1Q02641 598 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 RNASELQ05823 741 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 CSPP1Q1MSJ5 1256 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 KCNT2Q6UVM3 1135 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 SPPL3Q8TCT6 385 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 ZNF558Q96NG5 402 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 KCNG1Q9UIX4 513 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 USP20Q9Y2K6 914 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 RBM19Q9Y4C8 960 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 HES2Q9Y543 173 aa19.78■□□□□ 0.76
PDLIM2-206ENST00000409141 TTLL13PA6NNM8 815 aa19.77■□□□□ 0.76
PDLIM2-206ENST00000409141 N4BP3O15049 544 aa19.77■□□□□ 0.76
PDLIM2-206ENST00000409141 PPP6R2O75170 966 aa19.77■□□□□ 0.76
PDLIM2-206ENST00000409141 YEATS4O95619 227 aa19.77■□□□□ 0.76
PDLIM2-206ENST00000409141 KRT18P05783 430 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-206ENST00000409141 PLS3P13797 630 aa19.77■□□□□ 0.76
PDLIM2-206ENST00000409141 SMTNP53814 917 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms