RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PRMT7Q9NVM4 692 aaPredicted RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 LRWD1Q9UFC0 647 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 INPP5FQ9Y2H2 1132 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 MYO7AQ13402 2215 aa10.08□□□□□ -0.8
SNORD88A-201ENST00000408314 PLXNA4Q9HCM2 1894 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 LRRIQ4A6NIV6 560 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 MBTPS2O43462 519 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 TSPAN1O60635 241 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 EYA4O95677 639 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 ITGA4P13612 1032 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 DNAJB1P25685 340 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 IRS1P35568 1242 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 LTBRP36941 435 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 CCT6AP40227 531 aaKnown RBP10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 PRPHP41219 470 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 BCAR1P56945 870 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 CAPSQ13938 189 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 ZNF174Q15697 407 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 TMEM132AQ24JP5 1023 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 PLPP4Q5VZY2 271 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 KRT79Q5XKE5 535 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 MCTP1Q6DN14 999 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 ELMSAN1Q6PJG2 1045 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 PPP4R3CPQ6ZMV5 832 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 LRRC55Q6ZSA7 311 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 ADGRD2Q7Z7M1 963 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 CATSPER3Q86XQ3 398 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 SMRP1Q8NCR6 262 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 PIGOQ8TEQ8 1089 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 KIFAP3Q92845 792 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 IFT74Q96LB3 600 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 ADPGKQ9BRR6 497 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 CSRNP2Q9H175 543 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 POLR3FQ9H1D9 316 aaPredicted RBP10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 TBC1D13Q9NVG8 400 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 SSX2IPQ9Y2D8 614 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 SPTBN5Q9NRC6 3674 aaKnown RBP10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 ATG2AQ2TAZ0 1938 aa10.07□□□□□ -0.8
SNORD88A-201ENST00000408314 RBAK-RBAKDNI3L0D1 243 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 SPATA31C1P0DKV0 1188 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 GLRA2P23416 452 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 CA8P35219 290 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 EFNA5P52803 228 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 ZP2Q05996 745 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 MBTD1Q05BQ5 628 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 MAPK6Q16659 721 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 TPRNQ4KMQ1 711 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 SLC27A1Q6PCB7 646 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 TMEM184AQ6ZMB5 413 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 DDX53Q86TM3 631 aaKnown RBP10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 RBM23Q86U06 439 aaKnown RBP10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 SNX29Q8TEQ0 813 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 LPPQ93052 612 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 IGSF21Q96ID5 467 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 MINDY3Q9H8M7 445 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 DZANK1Q9NVP4 752 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 HCSTQ9UBK5 93 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 DPP7Q9UHL4 492 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 KCNG1Q9UIX4 513 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 GIT1Q9Y2X7 761 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
SNORD88A-201ENST00000408314 WNT7AO00755 349 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 N4BP3O15049 544 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 ZBTB39O15060 712 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 INPPL1O15357 1258 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 LINC01565O15544 149 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 DCXO43602 365 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 MED24O75448 989 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 OFD1O75665 1012 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 BMP15O95972 392 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 ALDH2P05091 517 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 CYP11B2P19099 503 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 HOXA11P31270 313 aaPredicted RBP10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 NAMPTP43490 491 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 ERVFC1P60507 584 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 PTGDRQ13258 359 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 CLUL1Q15846 466 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 FAM187BQ17R55 369 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 TMEM31Q5JXX7 168 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 CDCA2Q69YH5 1023 aaPredicted RBP10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 CES5AQ6NT32 575 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 DTHD1Q6ZMT9 781 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 MRPL43Q8N983 215 aaKnown RBP10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 DEPTORQ8TB45 409 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 TMX3Q96JJ7 454 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 MSLNLQ96KJ4 702 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 NECTIN4Q96NY8 510 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 RPS6KC1Q96S38 1066 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 TIPINQ9BVW5 301 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 EMILIN2Q9BXX0 1053 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 NT5C3AQ9H0P0 336 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 ZBP1Q9H171 429 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms