RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 FAM13AO94988 1023 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 CSPG5O95196 566 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 ARF4P18085 180 aaPredicted RBP11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 NPTX2P47972 431 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 NUCB2P80303 420 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 BTG3Q14201 252 aaPredicted RBP11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 AMHR2Q16671 573 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 AXDND1Q5T1B0 1012 aaPredicted RBP11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 ATL3Q6DD88 541 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 CCDC73Q6ZRK6 1079 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 DYMQ7RTS9 669 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 STAMQ92783 540 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 EIF2AQ9BY44 585 aaKnown RBP11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 CCDC113Q9H0I3 377 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 C2orf40Q9H1Z8 148 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 SEMA6BQ9H3T3 888 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 KMT5AQ9NQR1 393 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 TMEM161AQ9NX61 479 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 MTMR10Q9NXD2 777 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 MRPL42Q9Y6G3 142 aaKnown RBP11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 CHD9Q3L8U1 2897 aa11.35□□□□□ -0.59
TSPAN9-202ENST00000407263 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 K7ENM7 598 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 RFXAPO00287 272 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 NPTXRO95502 500 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 CTNNB1P35222 781 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 PRPF4BQ13523 1007 aaKnown RBP11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 MAPK6Q16659 721 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 CLLU1OSQ5K130 101 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 UBXN11Q5T124 520 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 NOTUMQ6P988 496 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 CMTR2Q8IYT2 770 aaKnown RBP11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 FIBCD1Q8N539 461 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 KCTD17Q8N5Z5 321 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 HELQQ8TDG4 1101 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 CDX2Q99626 313 aaPredicted RBP11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 TIPINQ9BVW5 301 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 RNF19AQ9NV58 838 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 PRMT7Q9NVM4 692 aaPredicted RBP11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 FAM13BQ9NYF5 915 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 KCND2Q9NZV8 630 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 INPP5FQ9Y2H2 1132 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 HES2Q9Y543 173 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 PCDHB2Q9Y5E7 798 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 CHD7Q9P2D1 2997 aa11.34□□□□□ -0.59
TSPAN9-202ENST00000407263 A0A0U1RQF3 1178 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 PLS3P13797 630 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 FOSL2P15408 326 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 PFKFB1P16118 471 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 HOXA11P31270 313 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 RAB27AP51159 221 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 POU5F1BQ06416 359 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 GIT2Q14161 759 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 E2F4Q16254 413 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 SPOUT1Q5T280 376 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 RESP18Q5W5W9 173 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 EEF1DP3Q658K8 133 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 PPP4R3CPQ6ZMV5 832 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 TAS1R3Q7RTX0 852 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 CRIPAKQ8N1N5 446 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 MICALL1Q8N3F8 863 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 ZNF689Q96CS4 500 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 TGS1Q96RS0 853 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 TRIM6Q9C030 488 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 NXF3Q9H4D5 531 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 PDZD7Q9H5P4 517 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 ELAC1Q9H777 363 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 ARHGAP28Q9P2N2 729 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 RCOR1Q9UKL0 485 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 ODF2LQ9ULJ1 636 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 IPPQ9Y573 584 aa11.33□□□□□ -0.6
TSPAN9-202ENST00000407263 PRRC2BQ5JSZ5 2229 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 A0A1B0GVL5 298 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 MYMKA6NI61 221 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 HOXA2O43364 376 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 HARSP12081 509 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 IDEP14735 1019 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 IGFBP4P22692 258 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 EFNA5P52803 228 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 ERVK-21P61565 698 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 SV2BQ7L1I2 683 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 LRRC43Q8N309 656 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 SMG8Q8ND04 991 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 DDX12PQ92771 950 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 PRIMPOLQ96LW4 560 aa11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 GAS2L1Q99501 681 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-202ENST00000407263 SCAND2PQ9GZW5 306 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms