RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RAC3P60763 192 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 TCIRG1Q13488 830 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 HDAC1Q13547 482 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 SAFB2Q14151 953 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 TAX1BP1Q86VP1 789 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 RASSF3Q86WH2 238 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 GPR135Q8IZ08 494 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 SAMD3Q8N6K7 520 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 ZNF610Q8N9Z0 462 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 PPP1R14CQ8TAE6 165 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 FBXO41Q8TF61 875 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 AGO3Q9H9G7 860 aaKnown RBP6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 OBP2AQ9NY56 170 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 GIT1Q9Y2X7 761 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 SLC30A1Q9Y6M5 507 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 WASHC2AQ641Q2 1341 aa6.39□□□□□ -1.39
HMGB1P13-201ENST00000406019 C2orf78A6NCI8 922 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PCDHGA12O60330 932 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 OPHN1O60890 802 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 RAD17O75943 681 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PF4V1P10720 104 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 CR2P20023 1033 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 CD40P25942 277 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 BCAR1P56945 870 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 ADCY2Q08462 1091 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 ODF1Q14990 250 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 DGKDQ16760 1214 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 KLHDC10Q6PID8 442 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 Q6ZSN1 163 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 CLEC14AQ86T13 490 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 LYSMD2Q8IV50 215 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 CMTR2Q8IYT2 770 aaKnown RBP6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 RTKN2Q8IZC4 609 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 FUKQ8N0W3 1084 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 C7orf31Q8N865 590 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 WDR48Q8TAF3 677 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 LMBR1Q8WVP7 490 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 NUP88Q99567 741 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 KRTAP4-11Q9BYQ6 195 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 MTG2Q9H4K7 406 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 JADE2Q9NQC1 790 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 USP36Q9P275 1121 aaKnown RBP6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 TMPRSS11EQ9UL52 423 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PCDHGA9Q9Y5G4 932 aaKnown RBP6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PCDHGA8Q9Y5G5 932 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PCDHGA7Q9Y5G6 932 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PCDHGA6Q9Y5G7 932 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PCDHGA3Q9Y5H0 932 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 PCDHGA2Q9Y5H1 932 aa6.38□□□□□ -1.39
HMGB1P13-201ENST00000406019 VSTM5A8MXK1 200 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 ZNF623O75123 536 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 PFKMP08237 780 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 LPOP22079 712 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 CCND1P24385 295 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 LSP1P33241 339 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 GPR3P46089 330 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 MEOX1P50221 254 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 ADAM15Q13444 863 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 GTF2H3Q13889 308 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 SYCP2LQ5T4T6 812 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 EPM2AIP1Q7L775 607 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 CMIPQ8IY22 773 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 OR14K1Q8NGZ2 314 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 AIFM3Q96NN9 605 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 PLA2G12BQ9BX93 195 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 KRTAP4-2Q9BYR5 136 aa6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 TOPORSQ9NS56 1045 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 POLR3BQ9NW08 1133 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 SAE1Q9UBE0 346 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 ZFR2Q9UPR6 939 aaKnown RBP6.37□□□□□ -1.39
HMGB1P13-201ENST00000406019 CYP2C19P33261 490 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 ADCY7P51828 1080 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 PURAQ00577 322 aaKnown RBP6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 ZNF568Q3ZCX4 644 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 MINDY4Q4G0A6 757 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 PGM2L1Q6PCE3 622 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 CXorf67Q86X51 503 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 SLC41A1Q8IVJ1 513 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 DVL3Q92997 716 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 DYDC2Q96IM9 177 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 ORAI2Q96SN7 254 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 KLC2Q9H0B6 622 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 PRDM12Q9H4Q4 367 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 PRDM11Q9NQV5 511 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 MSRAQ9UJ68 235 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 COMMD10Q9Y6G5 202 aa6.36□□□□□ -1.39
HMGB1P13-201ENST00000406019 SLC26A4O43511 780 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 CT47B1P0C2W7 299 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 TRIM27P14373 513 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 SELENOPP49908 381 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 MANFP55145 182 aaKnown RBP6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 SESN2P58004 480 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 GBX1Q14549 363 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 SLC4A10Q6U841 1118 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 GGNQ86UU5 652 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 RABGGTAQ92696 567 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 GPHA2Q96T91 129 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 ANLNQ9NQW6 1124 aa6.35□□□□□ -1.39
HMGB1P13-201ENST00000406019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms