RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 CETN1Q12798 172 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 MYBPC2Q14324 1141 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 SPDYCQ5MJ68 293 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 RPUSD2Q8IZ73 545 aaKnown RBP15.8■□□□□ 0.12
NUCB1-201ENST00000405315 UBL4BQ8N7F7 174 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
NUCB1-201ENST00000405315 CHURC1Q8WUH1 139 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 KRT35Q92764 455 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 PFASO15067 1338 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 PHF2O75151 1096 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 PAEPP09466 180 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 HNRNPH1P31943 449 aaKnown RBP15.8■□□□□ 0.12
NUCB1-201ENST00000405315 USP8P40818 1118 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 GCLMP48507 274 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 PLTPP55058 493 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 QPCTQ16769 361 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 HOOK3Q86VS8 718 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 C3orf20Q8ND61 904 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 RAPGEF5Q92565 580 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 C18orf8Q96DM3 657 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 SNX24Q9Y343 169 aa15.8■□□□□ 0.12
NUCB1-201ENST00000405315 MIF4GDA9UHW6 222 aaKnown RBP15.79■□□□□ 0.12
NUCB1-201ENST00000405315 BACH1O14867 736 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 PMS2P54278 862 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 EPC2Q52LR7 807 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 C6orf89Q6UWU4 347 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 MIER3Q7Z3K6 550 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 NEK9Q8TD19 979 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 TLCD1Q96CP7 247 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 ZSWIM1Q9BR11 485 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 CBWD1Q9BRT8 395 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.79■□□□□ 0.12
NUCB1-201ENST00000405315 DDX20Q9UHI6 824 aaKnown RBP15.79■□□□□ 0.12
NUCB1-201ENST00000405315 ZBTB21Q9ULJ3 1066 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 KIAA0391O15091 583 aaKnown RBP15.79■□□□□ 0.12
NUCB1-201ENST00000405315 CAND2O75155 1236 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 SHBGP04278 402 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 RIT2Q99578 217 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 MXRA8Q9BRK3 442 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 EPB41L4BQ9H329 900 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 TMEM206Q9H813 350 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.79■□□□□ 0.12
NUCB1-201ENST00000405315 TMOD2Q9NZR1 351 aa15.79■□□□□ 0.12
NUCB1-201ENST00000405315 LARSQ9P2J5 1176 aaKnown RBP15.79■□□□□ 0.12
NUCB1-201ENST00000405315 CHORDC1Q9UHD1 332 aaPredicted RBP15.79■□□□□ 0.12
NUCB1-201ENST00000405315 CLRN2A0PK11 232 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 GTF2A1P52655 376 aaPredicted RBP15.78■□□□□ 0.12
NUCB1-201ENST00000405315 GPC5P78333 572 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 MESDQ14696 234 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 ZDHHC24Q6UX98 284 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 FBXO25Q8TCJ0 367 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 ACCSQ96QU6 501 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■■■■ 52.7
NUCB1-201ENST00000405315 FBXO28Q9NVF7 368 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 ATMINO43313 823 aaPredicted RBP15.78■□□□□ 0.12
NUCB1-201ENST00000405315 HSPA6P17066 643 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 CHRNA3P32297 505 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 PTGIRP43119 386 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 CDR1P51861 262 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 GRIPAP1Q4V328 841 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 SEL1L2Q5TEA6 688 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 DENND2CQ68D51 928 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 PRELID2Q8N945 189 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 KAT5Q92993 513 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 VTI1AQ96AJ9 217 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 PABPC3Q9H361 631 aaKnown RBP15.78■□□□□ 0.12
NUCB1-201ENST00000405315 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
NUCB1-201ENST00000405315 P4HA2O15460 535 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 NUDT17P0C025 328 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 ITGB5P18084 799 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 COMTP21964 271 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 ALCAMQ13740 583 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 C1orf220Q5T0J3 134 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 CCDC121Q6ZUS5 278 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 ZSWIM2Q8NEG5 633 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 VCPKMTQ9H867 229 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 CNOT10Q9H9A5 744 aaKnown RBP15.77■□□□□ 0.12
NUCB1-201ENST00000405315 HSPBP1Q9NZL4 362 aa15.77■□□□□ 0.12
NUCB1-201ENST00000405315 TULP1O00294 542 aaPredicted RBP15.77■□□□□ 0.11
NUCB1-201ENST00000405315 RTN2O75298 545 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 SGPL1O95470 568 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 ACTN3Q08043 901 aaPredicted RBP15.77■□□□□ 0.11
NUCB1-201ENST00000405315 KRT27Q7Z3Y8 459 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 XXYLT1Q8NBI6 393 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 MDM1Q8TC05 714 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 PLEKHO2Q8TD55 490 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 PCDHB18PQ96TA0 734 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 GRHL1Q9NZI5 618 aa15.77■□□□□ 0.11
NUCB1-201ENST00000405315 ZNFX1Q9P2E3 1918 aaKnown RBP15.77■□□□□ 0.11
NUCB1-201ENST00000405315 H0YIN7 160 aa15.76■□□□□ 0.11
NUCB1-201ENST00000405315 RPL21P46778 160 aaKnown RBP15.76■□□□□ 0.11
NUCB1-201ENST00000405315 MXI1P50539 228 aa15.76■□□□□ 0.11
NUCB1-201ENST00000405315 DRG2P55039 364 aaKnown RBP15.76■□□□□ 0.11
NUCB1-201ENST00000405315 TCEAL1Q15170 157 aa15.76■□□□□ 0.11
NUCB1-201ENST00000405315 TTC27Q6P3X3 843 aa15.76■□□□□ 0.11
NUCB1-201ENST00000405315 NOP9Q86U38 636 aaKnown RBP15.76■□□□□ 0.11
NUCB1-201ENST00000405315 FAM160B2Q86V87 743 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms