RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 NRCAMQ92823 1304 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 A0A087WZ62 844 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 TTLL13PA6NNM8 815 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ZEB2O60315 1214 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 GNRH1P01148 92 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 CYP2C9P11712 490 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 GRK4P32298 578 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 GSDMDP57764 484 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 GJA9P57773 515 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 NLRP11P59045 1033 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 RBL2Q08999 1139 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 KCNH2Q12809 1159 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 MAPK6Q16659 721 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 KIZQ2M2Z5 673 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 SLC39A4Q6P5W5 647 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 FRMD5Q7Z6J6 570 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ZBTB33Q86T24 672 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 CDR2LQ86X02 465 aaPredicted RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 CBWD2Q8IUF1 395 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 TRIM59Q8IWR1 403 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 CCDC127Q96BQ5 260 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ZBTB45Q96K62 511 aaPredicted RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 FDXACB1Q9BRP7 624 aaPredicted RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 KATNAL1Q9BW62 490 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 FAM207AQ9NSI2 230 aaPredicted RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 SAGE1Q9NXZ1 904 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 IMPACTQ9P2X3 320 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 HDAC6Q9UBN7 1215 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 PTCH2Q9Y6C5 1203 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 C17orf102A2RUQ5 167 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 RRN3P2A6NIE6 340 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 SLC16A3O15427 465 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 TREHO43280 583 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 PRKCBP05771 671 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ASGR1P07306 291 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 TPM1P09493 284 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 TRIM49P0CI25 452 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 TRIM49CP0CI26 452 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 KRT13P13646 458 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 CASP14P31944 242 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 EFNA5P52803 228 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 KCNA10Q16322 511 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 SNRNP35Q16560 246 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 SEZ6Q53EL9 994 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 LRRC8AQ8IWT6 810 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ZC3H3Q8IXZ2 948 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 KIAA0319LQ8IZA0 1049 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 PXYLP1Q8TE99 480 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 HVCN1Q96D96 273 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 FAM213AQ9BRX8 229 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 MTG1Q9BT17 334 aaPredicted RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 KCNF1Q9H3M0 494 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 MINDY3Q9H8M7 445 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 METTL14Q9HCE5 456 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.05□□□□□ -1.768e-8■□□□□ 10.6
RTN4-208ENST00000404909 COL1A2P08123 1366 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 CLDN3O15551 220 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ASAP2O43150 1006 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 B4GALT5O43286 388 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 AFPP02771 609 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 EDN1P05305 212 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 DLATP10515 647 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 MSNP26038 577 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 ABCD1P33897 745 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 PBX1P40424 430 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 PHKA2P46019 1235 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ACOT2P49753 483 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 C1QTNF8P60827 252 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 HIC1Q14526 733 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 NBPF20Q3BBV1 942 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 RUFY4Q6ZNE9 571 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 GPIHBP1Q8IV16 184 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 SLAIN1Q8ND83 568 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 DNAJB3Q8WWF6 145 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 MSTO1Q9BUK6 570 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 MRPL4Q9BYD3 311 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 C2orf40Q9H1Z8 148 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 HMX1Q9NP08 348 aaPredicted RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 DMAC2Q9NW81 257 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 CGNQ9P2M7 1197 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 DDX20Q9UHI6 824 aaKnown RBP4.05□□□□□ -1.76
RTN4-208ENST00000404909 PHLPP2Q6ZVD8 1323 aa4.05□□□□□ -1.76
RTN4-208ENST00000404909 ARID2Q68CP9 1835 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 KIAA0100Q14667 2235 aaKnown RBP4.04□□□□□ -1.76
RTN4-208ENST00000404909 AKR1B15C9JRZ8 316 aaPredicted RBP4.04□□□□□ -1.76
RTN4-208ENST00000404909 ADAMTS4O75173 837 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 GYPCP04921 128 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 IQCF3P0C7M6 154 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 GNAT1P11488 350 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 SKILP12757 684 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 FGFR4P22455 802 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 FXR1P51114 621 aaKnown RBP eCLIP4.04□□□□□ -1.769e-8■■■■□ 20
RTN4-208ENST00000404909 MARSP56192 900 aaKnown RBP4.04□□□□□ -1.76
RTN4-208ENST00000404909 PTENP60484 403 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 OSTNP61366 133 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 DLG4P78352 724 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 APBA1Q02410 837 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 PRPF4BQ13523 1007 aaKnown RBP4.04□□□□□ -1.76
RTN4-208ENST00000404909 HS1BP3Q53T59 392 aa4.04□□□□□ -1.76
RTN4-208ENST00000404909 MAP3K21Q5TCX8 1036 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms