RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 MICALCLQ6ZW33 695 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 EPM2AIP1Q7L775 607 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-201ENST00000401921 FMNL3Q8IVF7 1028 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 IL31RAQ8NI17 732 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 SLC30A5Q8TAD4 765 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 CAVIN3Q969G5 261 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 BTBD6Q96KE9 485 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 ATP6V1G3Q96LB4 118 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 FNBP1Q96RU3 617 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
HDAC9-201ENST00000401921 TCHPQ9BT92 498 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 ISCUQ9H1K1 167 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 KMT5AQ9NQR1 393 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 GDF3Q9NR23 364 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 HSPBP1Q9NZL4 362 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 MTUS1Q9ULD2 1270 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 ODF2LQ9ULJ1 636 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 ALG6Q9Y672 507 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 MYH4Q9Y623 1939 aa8.3□□□□□ -1.08
HDAC9-201ENST00000401921 WNK3Q9BYP7 1800 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 GSTTP1A0A1W2PQM5 241 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 ZNF233A6NK53 670 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 CYP3A4P08684 503 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 CAP2P40123 477 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 SOX10P56693 466 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 IFT88Q13099 833 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 SPP2Q13103 211 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 DMP1Q13316 513 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-201ENST00000401921 MTMR3Q13615 1198 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 PRAMEF18Q5VWM3 479 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 PHLDB3Q6NSJ2 640 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 FOXR2Q6PJQ5 311 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 B4GALNT4Q76KP1 1039 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 PALB2Q86YC2 1186 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 SLC5A5Q92911 643 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 CCDC114Q96M63 670 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 MKNK1Q9BUB5 465 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
HDAC9-201ENST00000401921 MTRF1LQ9UGC7 380 aaKnown RBP8.29□□□□□ -1.08
HDAC9-201ENST00000401921 EXOC7Q9UPT5 735 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 USTQ9Y2C2 406 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 DENND3A2RUS2 1198 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 ANKRD62A6NC57 917 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 ITGB5P18084 799 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 TMOD1P28289 359 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 PRKCIP41743 596 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 RPS6P62753 249 aaKnown RBP8.29□□□□□ -1.08
HDAC9-201ENST00000401921 GPC5P78333 572 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 CALCOCO2Q13137 446 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 PPP2R5CQ13362 524 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 BTNL9Q6UXG8 535 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 RNF207Q6ZRF8 634 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 NT5DC3Q86UY8 548 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 RUBCNQ92622 972 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 FAM84AQ96KN4 292 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 MRIQ9BWK5 157 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 FAM114A2Q9NRY5 505 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 SUCLA2Q9P2R7 463 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-201ENST00000401921 ASIC3Q9UHC3 531 aa8.29□□□□□ -1.08
HDAC9-201ENST00000401921 HMGB1P1B2RPK0 211 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 SGPL1O95470 568 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 TMEM253P0C7T8 217 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 KCNJ1P48048 391 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 PDE6CP51160 858 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 MFAP3P55082 362 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 MAGOHP61326 146 aaKnown RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 C2CD6Q53TS8 623 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 DENND2CQ68D51 928 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 USP37Q86T82 979 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 CBWD2Q8IUF1 395 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 ARHGEF19Q8IW93 802 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 ACTRT1Q8TDG2 376 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 KIFAP3Q92845 792 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 NT5C1BQ96P26 610 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 SIX2Q9NPC8 291 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 USP20Q9Y2K6 914 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 CAPN7Q9Y6W3 813 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 MYH11P35749 1972 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 ONECUT3O60422 494 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 LSP1P33241 339 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 FLT3P36888 993 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 PPP3CAQ08209 521 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 TRIP13Q15645 432 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 MTERF2Q49AM1 385 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 RHOT2Q8IXI1 618 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 ZSWIM2Q8NEG5 633 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 CABS1Q96KC9 395 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 IFT74Q96LB3 600 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 IWS1Q96ST2 819 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 PI4K2AQ9BTU6 479 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 NR2E1Q9Y466 385 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 RREB1Q92766 1687 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 CCDC189A1A4V9 331 aa8.28□□□□□ -1.08
HDAC9-201ENST00000401921 GTPBP10A4D1E9 387 aaKnown RBP8.28□□□□□ -1.08
HDAC9-201ENST00000401921 A6NNZ2 444 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms