RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 PSPC1Q8WXF1 523 aaKnown RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 MAGEC2Q9UBF1 373 aaPredicted RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 DUSP11O75319 330 aaKnown RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 CALCAP01258 141 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 HMGCRP04035 888 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 CYP2C9P11712 490 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 MUTP22033 750 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 RBL2Q08999 1139 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 SYCP1Q15431 976 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 THNSL1Q8IYQ7 743 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 TSG101Q99816 390 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 TYW1Q9NV66 732 aaKnown RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 HSPBP1Q9NZL4 362 aa12.8□□□□□ -0.36
SKA3-203ENST00000400018 ZNF215Q9UL58 517 aaPredicted RBP12.8□□□□□ -0.36
SKA3-203ENST00000400018 A0A0U1RQJ8 604 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 A0A1B0GTH6 734 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 BICDL2A1A5D9 508 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 KIF20AO95235 890 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 CAVIN2O95810 425 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 SLC9A1P19634 815 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 SMTNP53814 917 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 GTF2BQ00403 316 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 CBWD6Q4V339 395 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 CBWD3Q5JTY5 395 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 CBWD5Q5RIA9 395 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 SARM1Q6SZW1 724 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 C7orf31Q8N865 590 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 ATRIPQ8WXE1 791 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 KIFAP3Q92845 792 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
SKA3-203ENST00000400018 ARHGAP28Q9P2N2 729 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 AJAP1Q9UKB5 411 aaPredicted RBP12.79□□□□□ -0.36
SKA3-203ENST00000400018 CASP14P31944 242 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 GCLMP48507 274 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 MTF1Q14872 753 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 LHX8Q68G74 356 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 NLRC4Q9NPP4 1024 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 TFR2Q9UP52 801 aa12.79□□□□□ -0.36
SKA3-203ENST00000400018 LIG4P49917 911 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 CPT1AP50416 773 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 APOL6Q9BWW8 343 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 RNF208Q9H0X6 261 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 PTPRJQ12913 1337 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 C5orf42Q9H799 3197 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 IGKV6-21A0A0C4DH24 114 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 CETN3O15182 167 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
SKA3-203ENST00000400018 KCNH2Q12809 1159 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 FAM186BQ8IYM0 893 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 KCND2Q9NZV8 630 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 CACNG4Q9UBN1 327 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
SKA3-203ENST00000400018 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
SKA3-203ENST00000400018 TRAF3IP3Q9Y228 551 aa12.78□□□□□ -0.36
SKA3-203ENST00000400018 ZNF236Q9UL36 1845 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 PDXKO00764 312 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 CLSTN1O94985 981 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 ARID5AQ03989 594 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 LRRC63Q05C16 580 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 KCNMA1Q12791 1236 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 SLC9C1Q4G0N8 1177 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 E4F1Q66K89 784 aaPredicted RBP12.77□□□□□ -0.36
SKA3-203ENST00000400018 HS2ST1Q7LGA3 356 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 MSL3Q8N5Y2 521 aaKnown RBP12.77□□□□□ -0.36
SKA3-203ENST00000400018 DIS3LQ8TF46 1054 aaKnown RBP12.77□□□□□ -0.36
SKA3-203ENST00000400018 FAM167AQ96KS9 214 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 PI4K2AQ9BTU6 479 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 PDE11AQ9HCR9 933 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 CHD7Q9P2D1 2997 aa12.77□□□□□ -0.36
SKA3-203ENST00000400018 CEP290O15078 2479 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 MSCO60682 206 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 GYPCP04921 128 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 PRKCBP05771 671 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 GUCY2FP51841 1108 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 GJA9P57773 515 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 PPP3CAQ08209 521 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 MAP4K3Q8IVH8 894 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 MRFAP1L1Q96HT8 127 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.37
SKA3-203ENST00000400018 MAF1Q9H063 256 aa12.77□□□□□ -0.37
SKA3-203ENST00000400018 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
SKA3-203ENST00000400018 MEIS3P2A8K0S8 358 aa12.76□□□□□ -0.37
SKA3-203ENST00000400018 CALUO43852 315 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms