RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 NME3Q13232 169 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 LAMB3Q13751 1172 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SYTL3Q4VX76 610 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 TRIM42Q8IWZ5 723 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SLITRK1Q96PX8 696 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 CDK5RAP1Q96SZ6 601 aaKnown RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 TRIM54Q9BYV2 358 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 GLIS2Q9BZE0 524 aaPredicted RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 XPNPEP3Q9NQH7 507 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 KLHL8Q9P2G9 620 aaPredicted RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 SLC25A13Q9UJS0 675 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 DAAM1Q9Y4D1 1078 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 MROH2AA6NES4 1674 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 EIF3DO15371 548 aaKnown RBP eCLIP8.49□□□□□ -1.05
USP47-203ENST00000399455 NMT2O60551 498 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 TJP3O95049 919 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 IFNA8P32881 189 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 NDUFA8P51970 172 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SCFD1Q8WVM8 642 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 KLC2Q9H0B6 622 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 ZWILCHQ9H900 591 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 CLCA2Q9UQC9 943 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SLIT1O75093 1534 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 POLRMTO00411 1230 aaKnown RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 ASMTLO95671 621 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 ARHGEF7Q14155 803 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 EPHA10Q5JZY3 1008 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 NUF2Q9BZD4 464 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 CYP26B1Q9NR63 512 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 PDS5AQ29RF7 1337 aaKnown RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 GPR75-ASB3A0A0A6YYF3 556 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 CCDC151A5D8V7 595 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 TBX3O15119 743 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 BUB1O43683 1085 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 HIP1RO75146 1068 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 CSF1RP07333 972 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 DYNLT1P63172 113 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SLFNL1Q499Z3 407 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 MAP3K21Q5TCX8 1036 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 VPS39Q96JC1 886 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 TMEM260Q9NX78 707 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 E5RI56 91 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 CREB3O43889 395 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 EYA4O95677 639 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 NR3C1P04150 777 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 DEFB128Q7Z7B8 93 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SFR1Q86XK3 245 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 POTEDQ86YR6 584 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 EPAS1Q99814 870 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 LY9Q9HBG7 655 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 JRKLQ9Y4A0 524 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 HSPA6P17066 643 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 SNRPFP62306 86 aaKnown RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 AP1B1Q10567 949 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 ELAVL2Q12926 359 aaKnown RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 PTK2BQ14289 1009 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 TTC13Q8NBP0 860 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 ATG4CQ96DT6 458 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 RBM41Q96IZ5 413 aaKnown RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 PLEKHA5Q9HAU0 1116 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 NGRNQ9NPE2 291 aaKnown RBP8.49□□□□□ -1.05
USP47-203ENST00000399455 PSMD3O43242 534 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 MNAT1P51948 309 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 TMEM62Q0P6H9 643 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 ATF7IP2Q5U623 682 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 MRPS31Q92665 395 aaKnown RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 YIPF2Q9BWQ6 316 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 PPLO60437 1756 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 COL5A2P05997 1499 aaPredicted RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 GSG1L2A8MUP6 293 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SYNCRIPO60506 623 aaKnown RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 CCNE1P24864 410 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 TCF7P36402 384 aaPredicted RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 ACADSBP45954 432 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SULT1E1P49888 294 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 CDR2Q01850 454 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 ADCY1Q08828 1119 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 PAN2Q504Q3 1202 aaKnown RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 CES5AQ6NT32 575 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 TMEM270Q6UE05 265 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 OOSP2Q86WS3 158 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 DNERQ8NFT8 737 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 ZC3H15Q8WU90 426 aaKnown RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 MXRA8Q9BRK3 442 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SPON2Q9BUD6 331 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 AP3B1O00203 1094 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 CA12O43570 354 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 ADCY3O60266 1144 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 ZMYND10O75800 440 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 NPTXRO95502 500 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 MOCS2O96007 188 aaPredicted RBP8.48□□□□□ -1.05
USP47-203ENST00000399455 LCP1P13796 627 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 GNA15P30679 374 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 SERPINB6P35237 376 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 HSD17B4P51659 736 aa8.48□□□□□ -1.05
USP47-203ENST00000399455 PRKCEQ02156 737 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms