RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CLCN4P51793 760 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 INF2Q27J81 1249 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 PLA2G4FQ68DD2 849 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 PPP4R3AQ6IN85 833 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 TMC5Q6UXY8 1006 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 KRT25Q7Z3Z0 450 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 CABP7Q86V35 215 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 C4orf19Q8IY42 314 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 TDRD5Q8NAT2 981 aaKnown RBP13.36□□□□□ -0.27
SYNE4-203ENST00000397428 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 EMILIN2Q9BXX0 1053 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 WRAP73Q9P2S5 460 aaPredicted RBP13.36□□□□□ -0.27
SYNE4-203ENST00000397428 INPP5FQ9Y2H2 1132 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 FAN1Q9Y2M0 1017 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
SYNE4-203ENST00000397428 NRP1O14786 923 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 TBX3O15119 743 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 INPPL1O15357 1258 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
SYNE4-203ENST00000397428 KLRC2P26717 231 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 CA8P35219 290 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 RFC5P40937 340 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 NBL1P41271 181 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 LAMTOR4Q0VGL1 99 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 EPHA7Q15375 998 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 C15orf39Q6ZRI6 1047 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 URGCPQ8TCY9 931 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 SLC7A3Q8WY07 619 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 HAS1Q92839 578 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 TMEM143Q96AN5 459 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 CEP170P1Q96L14 293 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
SYNE4-203ENST00000397428 PHF20Q9BVI0 1012 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 SFXN1Q9H9B4 322 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 ZFHX2Q9C0A1 2572 aaPredicted RBP13.35□□□□□ -0.27
SYNE4-203ENST00000397428 CFAP54Q96N23 3096 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 CNTNAP2Q9UHC6 1331 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 ZDBF2Q9HCK1 2354 aa13.35□□□□□ -0.27
SYNE4-203ENST00000397428 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 CPLX1O14810 134 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 PAPLNO95428 1278 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 GCFC2P16383 781 aaKnown RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 NPR3P17342 541 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 TDGQ13569 410 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 LETM2Q2VYF4 491 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 KIAA0319Q5VV43 1072 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 OTUD6AQ7L8S5 288 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 OTOP3Q7RTS5 596 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 RNF168Q8IYW5 571 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 SMG8Q8ND04 991 aaKnown RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 PSPC1Q8WXF1 523 aaKnown RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 FAM193BQ96PV7 902 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 RHOBTB2Q9BYZ6 727 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 RSAD1Q9HA92 442 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 UBN1Q9NPG3 1134 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
SYNE4-203ENST00000397428 KCNJ14Q9UNX9 436 aa13.34□□□□□ -0.27
SYNE4-203ENST00000397428 ZBTB39O15060 712 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 GAS2O43903 313 aaKnown RBP13.33□□□□□ -0.28
SYNE4-203ENST00000397428 C1RP00736 705 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 POMCP01189 267 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 POU5F1BQ06416 359 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.28
SYNE4-203ENST00000397428 CPLX2Q6PUV4 134 aaKnown RBP13.33□□□□□ -0.28
SYNE4-203ENST00000397428 ASCL5Q7RTU5 278 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
SYNE4-203ENST00000397428 COLGALT2Q8IYK4 626 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 TCP11Q8WWU5 503 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 RXFP1Q9HBX9 757 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 MARCH5Q9NX47 278 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 MIOSQ9NXC5 875 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 SSX2IPQ9Y2D8 614 aa13.33□□□□□ -0.28
SYNE4-203ENST00000397428 DENND4AQ7Z401 1863 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 CCDC194A0A1B0GVG4 234 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 PI15O43692 258 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 SLITRK3O94933 977 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 SOD2P04179 222 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYNE4-203ENST00000397428 ITGA4P13612 1032 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 AXLP30530 894 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 YWHABP31946 246 aaKnown RBP13.32□□□□□ -0.28
SYNE4-203ENST00000397428 PTENP60484 403 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 DSC1Q08554 894 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 SPIRE1Q08AE8 756 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 STK3Q13188 491 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 CCDC149Q6ZUS6 474 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms