RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NRP1O14786 923 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 DCNP07585 359 aaKnown RBP16.82■□□□□ 0.28
SEC13-206ENST00000397102 AK2P54819 239 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 XKR3Q5GH77 459 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 SPECC1Q5M775 1068 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 RHPN2Q8IUC4 686 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 C1orf210Q8IVY1 113 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 RDM1Q8NG50 284 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 GPR152Q8TDT2 470 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 SLC5A5Q92911 643 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 RPS6KC1Q96S38 1066 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 TEKT3Q9BXF9 490 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 UNC45AQ9H3U1 944 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 RSAD1Q9HA92 442 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
SEC13-206ENST00000397102 SIT1Q9Y3P8 196 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 PCDHB2Q9Y5E7 798 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 MIA3Q5JRA6 1907 aa16.82■□□□□ 0.28
SEC13-206ENST00000397102 C2CD2LO14523 706 aa16.81■□□□□ 0.28
SEC13-206ENST00000397102 TEX28O15482 410 aa16.81■□□□□ 0.28
SEC13-206ENST00000397102 STBD1O95210 358 aa16.81■□□□□ 0.28
SEC13-206ENST00000397102 PAPLNO95428 1278 aa16.81■□□□□ 0.28
SEC13-206ENST00000397102 GLUD1P00367 558 aa16.81■□□□□ 0.28
SEC13-206ENST00000397102 LRCH2Q5VUJ6 765 aa16.81■□□□□ 0.28
SEC13-206ENST00000397102 DHX32Q7L7V1 743 aaKnown RBP16.81■□□□□ 0.28
SEC13-206ENST00000397102 MRPL10Q7Z7H8 261 aaKnown RBP16.81■□□□□ 0.28
SEC13-206ENST00000397102 SMG7Q92540 1137 aaKnown RBP16.81■□□□□ 0.28
SEC13-206ENST00000397102 ANO2Q9NQ90 1003 aa16.81■□□□□ 0.28
SEC13-206ENST00000397102 CEP250Q9BV73 2442 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 TMEM150BA6NC51 233 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 MAFO75444 373 aaPredicted RBP16.8■□□□□ 0.28
SEC13-206ENST00000397102 ADD1P35611 737 aaKnown RBP16.8■□□□□ 0.28
SEC13-206ENST00000397102 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
SEC13-206ENST00000397102 MIER3Q7Z3K6 550 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 RNF168Q8IYW5 571 aaPredicted RBP16.8■□□□□ 0.28
SEC13-206ENST00000397102 DCLK2Q8N568 766 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 HDAC7Q8WUI4 952 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 ZNF707Q96C28 371 aaPredicted RBP16.8■□□□□ 0.28
SEC13-206ENST00000397102 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 NLRP4Q96MN2 994 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 RXFP1Q9HBX9 757 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 SLC2A4RGQ9NR83 387 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 MARCH5Q9NX47 278 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.8■□□□□ 0.28
SEC13-206ENST00000397102 CACNA1BQ00975 2339 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 CACNA1IQ9P0X4 2223 aa16.8■□□□□ 0.28
SEC13-206ENST00000397102 TDRD15B5MCY1 1934 aaKnown RBP16.79■□□□□ 0.28
SEC13-206ENST00000397102 MYH15Q9Y2K3 1946 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 EDIL3O43854 480 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 RFPL2O75678 378 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 PSMD10O75832 226 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 C1RP00736 705 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 POMCP01189 267 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 LAMP2P13473 410 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 GLUD2P49448 558 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 USP11P51784 963 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 KIAA0319Q5VV43 1072 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 DCLRE1AQ6PJP8 1040 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 KSR1Q8IVT5 923 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 SUMF1Q8NBK3 374 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 PJA1Q8NG27 643 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 JPH2Q9BR39 696 aaPredicted RBP16.79■□□□□ 0.28
SEC13-206ENST00000397102 IFT122Q9HBG6 1241 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 PATJQ8NI35 1801 aa16.79■□□□□ 0.28
SEC13-206ENST00000397102 NCOR2Q9Y618 2525 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 ANHXE9PGG2 379 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 PRPF3O43395 683 aaKnown RBP16.78■□□□□ 0.28
SEC13-206ENST00000397102 KINO60870 393 aaKnown RBP16.78■□□□□ 0.28
SEC13-206ENST00000397102 EFEMP2O95967 443 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 HTR4Q13639 388 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 TAS1R1Q7RTX1 841 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 COLGALT2Q8IYK4 626 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 GJA10Q969M2 543 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 BORCS6Q96GS4 357 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 PLEKHA4Q9H4M7 779 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 PIDD1Q9HB75 910 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 ZDHHC7Q9NXF8 308 aa16.78■□□□□ 0.28
SEC13-206ENST00000397102 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
SEC13-206ENST00000397102 PRG3Q9Y2Y8 225 aaPredicted RBP16.78■□□□□ 0.28
SEC13-206ENST00000397102 POTEMA6NI47 508 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 MYBP10242 640 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 GLULP15104 373 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.28
SEC13-206ENST00000397102 STARD6P59095 220 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 DSG1Q02413 1049 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 RSPO4Q2I0M5 234 aaPredicted RBP16.77■□□□□ 0.28
SEC13-206ENST00000397102 UBXN11Q5T124 520 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 B3GNT9Q6UX72 402 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 GET4Q7L5D6 327 aaPredicted RBP16.77■□□□□ 0.28
SEC13-206ENST00000397102 CNNM3Q8NE01 707 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 SHDQ96IW2 340 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 FOXQ1Q9C009 403 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms