RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 SLC20A2Q08357 652 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 IKQ13123 557 aaPredicted RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 PPFIA1Q13136 1202 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 FAM187BQ17R55 369 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 C1orf220Q5T0J3 134 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 PADI6Q6TGC4 694 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZPBP2Q6X784 338 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZNF571Q7Z3V5 609 aaPredicted RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 XXYLT1Q8NBI6 393 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 NSUN6Q8TEA1 469 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 CENPTQ96BT3 561 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 MPHOSPH6Q99547 160 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 BHMT2Q9H2M3 363 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 HOXC10Q9NYD6 342 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 KCNH4Q9UQ05 1017 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 CAPN6Q9Y6Q1 641 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 HIP1RO75146 1068 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 SLC25A27O95847 323 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 TFRCP02786 760 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 KRT18P05783 430 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 H2AFZP0C0S5 128 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 KRT13P13646 458 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 NAMPTP43490 491 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 CASP5P51878 434 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 PSMC6P62333 389 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ITGB3BPQ13352 177 aaPredicted RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 RASA2Q15283 850 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 TARBP2Q15633 366 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 H2AFVQ71UI9 128 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 NT5DC3Q86UY8 548 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 TTC39CQ8N584 583 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZNF280CQ8ND82 737 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 JPH2Q9BR39 696 aaPredicted RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 DEF6Q9H4E7 631 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 PRDM16Q9HAZ2 1276 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZCCHC17Q9NP64 241 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 HOMER3Q9NSC5 361 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 CALCOCO1Q9P1Z2 691 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 CNOT7Q9UIV1 285 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 NOCTQ9UK39 431 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZHX2Q9Y6X8 837 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZNF487B1APH4 448 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 NFKBIEO00221 500 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 DDX3YO15523 660 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 TCEA3O75764 348 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 POTEJP0CG39 1038 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 VCAM1P19320 739 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 IBSPP21815 317 aaPredicted RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 EPS15P42566 896 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 FNTAP49354 379 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 KLK7P49862 253 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 PTENP60484 403 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 VSNL1P62760 191 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 TAP1Q03518 808 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ARID5AQ03989 594 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 RAD51AP2Q09MP3 1159 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 BIRC3Q13489 604 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 MTMR1Q13613 665 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 EZH2Q15910 746 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZNF568Q3ZCX4 644 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 DRICH1Q6PGQ1 229 aaPredicted RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 CYFIP1Q7L576 1253 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 TMEM161BQ8NDZ6 487 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ACER1Q8TDN7 264 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZC3H15Q8WU90 426 aaKnown RBP6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 HPS3Q969F9 1004 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 FGFBP2Q9BYJ0 223 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 MMRN2Q9H8L6 949 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 GCNT4Q9P109 453 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 PCDHA10Q9Y5I2 948 aa6.51□□□□□ -1.37
RAPGEF4-203ENST00000397087 ADGRA2Q96PE1 1338 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 IGKV6-21A0A0C4DH24 114 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 PGRMC1O00264 195 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CXCL11O14625 94 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 GDF11O95390 407 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 FAM163BP0C2L3 166 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 HOXD8P13378 290 aaPredicted RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 PTPRAP18433 802 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CHRNA5P30532 468 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ARL2P36404 184 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 VAMP7P51809 220 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 SMTNP53814 917 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 MFAP3P55082 362 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 POLR2FP61218 127 aaKnown RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 CAV1Q03135 178 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 XKR3Q5GH77 459 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 PLPPR4Q7Z2D5 763 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 NT5DC4Q86YG4 428 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ABRAQ8N0Z2 381 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 L3MBTL3Q96JM7 780 aaPredicted RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZNF518BQ9C0D4 1074 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ACAD9Q9H845 621 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 VRTNQ9H8Y1 702 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 GTF3C4Q9UKN8 822 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 ZNF214Q9UL59 606 aaPredicted RBP6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 EFR3BQ9Y2G0 817 aa6.5□□□□□ -1.37
RAPGEF4-203ENST00000397087 VGLL3A8MV65 326 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms