RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MAP3K15Q6ZN16 1313 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 INSRP06213 1382 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC53A6NM62 1247 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 GOLGA8TH3BQL2 631 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 GOLGA8HP0CJ92 632 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ERFP50548 548 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 SRPK1Q96SB4 655 aaKnown RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 CARD9Q9H257 536 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 EXOSC4Q9NPD3 245 aaKnown RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 BTKQ06187 659 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 DIS3LQ8TF46 1054 aaKnown RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 TRIM54Q9BYV2 358 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 SPRTNQ9H040 489 aaPredicted RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 BATF3Q9NR55 127 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 MAST1Q9Y2H9 1570 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 CD109Q6YHK3 1445 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ROR1Q01973 937 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 CERKLQ49MI3 558 aaPredicted RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ARMCX4Q5H9R4 360 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 RCSD1Q6JBY9 416 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 NDFIP2Q9NV92 336 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 SRGAP2O75044 1071 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 SCRN1Q12765 414 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 PPM1NQ8N819 430 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ATP11CQ8NB49 1132 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 SLC7A5P2Q9GIP4 190 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 PCDHA4Q9UN74 947 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ZSCAN20P17040 1043 aaPredicted RBP10.93□□□□□ -0.66
COL4A4-201ENST00000396625 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
COL4A4-201ENST00000396625 ZAP70P43403 619 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 GRAMD1CQ8IYS0 662 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 TERB1Q8NA31 727 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 DDHD1Q8NEL9 900 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 IL17RAQ96F46 866 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 NACC1Q96RE7 527 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 CYP27A1Q02318 531 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 ERICH1Q86X53 443 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 RAB42Q8N4Z0 105 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SMARCAD1Q9H4L7 1026 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 CCDC134Q9H6E4 229 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SUPT3HB4E1H0 165 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 HSPA9P38646 679 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC74AQ0VAA2 488 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 TSC22D1Q15714 1073 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 AASDHQ4L235 1098 aaPredicted RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 NAALADL2Q58DX5 795 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 C11orf74Q86VG3 221 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 PASD1Q8IV76 773 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 WWP1Q9H0M0 922 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 RPF1Q9H9Y2 349 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 NGRNQ9NPE2 291 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 TMA7Q9Y2S6 64 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 TRIM49P0CI25 452 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 TRIM49CP0CI26 452 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC63Q05C16 580 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SMAD1Q15797 465 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SHROOM1Q2M3G4 852 aaPredicted RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 PPP4R3CPQ6ZMV5 832 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 GRAMD1AQ96CP6 724 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 ZCWPW1Q9H0M4 648 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 FANCEQ9HB96 536 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 RGL1Q9NZL6 768 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 TNKSO95271 1327 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 H0YIN7 160 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 PPP6R2O75170 966 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 NCALDP61601 193 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 CCDC81Q6ZN84 652 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 CHMP1BQ7LBR1 199 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 TAS2R42Q7RTR8 314 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 C14orf93Q9H972 538 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 MTMR6Q9Y217 621 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 AP4S1Q9Y587 144 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 URB2Q14146 1524 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 DNMT1P26358 1616 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 RNMTO43148 476 aaKnown RBP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 OSTNP61366 133 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 DLGAP5Q15398 846 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 ELMSAN1Q6PJG2 1045 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 ELMOD1Q8N336 334 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 A0A0D9SFI3 127 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 BTBD18B2RXH4 712 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 M0R2C6 588 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 LAMB3Q13751 1172 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 PKP1Q13835 747 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 NDUFA5Q16718 116 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 C6orf10Q5SRN2 563 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 DCAF15Q66K64 600 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 C16orf62Q7Z3J2 963 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SCFD1Q8WVM8 642 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 EIF3DO15371 548 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL4A4-201ENST00000396625 STRNO43815 780 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 CHRNA3P32297 505 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 ALCAMQ13740 583 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 KRT24Q2M2I5 525 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SFR1Q86XK3 245 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC49Q8IUZ0 686 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms