RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 TNNC1P63316 161 aa17.95■□□□□ 0.46
TRIM39-205ENST00000396551 SNRNP48Q6IEG0 339 aaKnown RBP17.95■□□□□ 0.46
TRIM39-205ENST00000396551 WRNIP1Q96S55 665 aa17.95■□□□□ 0.46
TRIM39-205ENST00000396551 AGPAT1Q99943 283 aa17.95■□□□□ 0.46
TRIM39-205ENST00000396551 TMEM117Q9H0C3 514 aa17.95■□□□□ 0.46
TRIM39-205ENST00000396551 ZNF214Q9UL59 606 aaPredicted RBP17.95■□□□□ 0.46
TRIM39-205ENST00000396551 NOC2LQ9Y3T9 749 aaKnown RBP17.95■□□□□ 0.46
TRIM39-205ENST00000396551 STBD1O95210 358 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 CCDC172P0C7W6 258 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 HMGCS2P54868 508 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 SOX10P56693 466 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 SYCE1Q8N0S2 351 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 RASGEF1CQ8N431 466 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 THAP2Q9H0W7 228 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 TCEAL9Q9UHQ7 104 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 NPTX2P47972 431 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 MCCD1P59942 119 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-205ENST00000396551 DCAF15Q66K64 600 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 ZNF746Q6NUN9 644 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-205ENST00000396551 CBWD2Q8IUF1 395 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 IFT81Q8WYA0 676 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 GPRASP2Q96D09 838 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 SENP7Q9BQF6 1050 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 AP1M1Q9BXS5 423 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 TBX20Q9UMR3 447 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 FZD9O00144 591 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 KCNA2P16389 499 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 DSG3P32926 999 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 SNRPFP62306 86 aaKnown RBP17.94■□□□□ 0.46
TRIM39-205ENST00000396551 NNTQ13423 1086 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 FMNL3Q8IVF7 1028 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 CTNNBL1Q8WYA6 563 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-205ENST00000396551 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.464e-7■■□□□ 14.2
TRIM39-205ENST00000396551 SEPT11Q9NVA2 429 aaKnown RBP17.94■□□□□ 0.46
TRIM39-205ENST00000396551 PPP1R1BQ9UD71 204 aaPredicted RBP17.94■□□□□ 0.46
TRIM39-205ENST00000396551 ADAMTS5Q9UNA0 930 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 PCDHA10Q9Y5I2 948 aa17.94■□□□□ 0.46
TRIM39-205ENST00000396551 CCDC169A6NNP5 214 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 PGRMC1O00264 195 aaKnown RBP17.93■□□□□ 0.46
TRIM39-205ENST00000396551 XRRA1Q6P2D8 792 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 NLRX1Q86UT6 975 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 MAP4K3Q8IVH8 894 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 RDM1Q8NG50 284 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 AFAP1L1Q8TED9 768 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 SAAL1Q96ER3 474 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 SH3GL2Q99962 352 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 GABBR1Q9UBS5 961 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 COG5Q9UP83 839 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 PFASO15067 1338 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 PAK2Q13177 524 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 TMEM132BQ14DG7 1078 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 C12orf42Q96LP6 360 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 IWS1Q96ST2 819 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.93■□□□□ 0.46
TRIM39-205ENST00000396551 DDX3YO15523 660 aaKnown RBP17.93■□□□□ 0.46
TRIM39-205ENST00000396551 MXI1P50539 228 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 SLC39A4Q6P5W5 647 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 PROCA1Q8NCQ7 364 aaPredicted RBP17.93■□□□□ 0.46
TRIM39-205ENST00000396551 AMFRQ9UKV5 643 aa17.93■□□□□ 0.46
TRIM39-205ENST00000396551 ZNFX1Q9P2E3 1918 aaKnown RBP17.92■□□□□ 0.46
TRIM39-205ENST00000396551 ZNF541Q9H0D2 1346 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 ITGA4P13612 1032 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 CAPN2P17655 700 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 ERVK-9P63128 1117 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 CETN1Q12798 172 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 SNRNP35Q16560 246 aaKnown RBP17.92■□□□□ 0.46
TRIM39-205ENST00000396551 ANGEL2Q5VTE6 544 aaKnown RBP17.92■□□□□ 0.46
TRIM39-205ENST00000396551 SEMA4DQ92854 862 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 CALR3Q96L12 384 aaKnown RBP17.92■□□□□ 0.46
TRIM39-205ENST00000396551 PICK1Q9NRD5 415 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 USP20Q9Y2K6 914 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 BHMG1C9JSJ3 638 aaPredicted RBP17.92■□□□□ 0.46
TRIM39-205ENST00000396551 PMM2O15305 246 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 DCAF12L1Q5VU92 463 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 KREMEN1Q96MU8 473 aa17.92■□□□□ 0.46
TRIM39-205ENST00000396551 ADGRA3Q8IWK6 1321 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 DENND3A2RUS2 1198 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 CNGA1P29973 690 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 ACTN2P35609 894 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 MAP2K1Q02750 393 aaPredicted RBP17.91■□□□□ 0.46
TRIM39-205ENST00000396551 SLC17A8Q8NDX2 589 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 DDX47Q9H0S4 455 aaKnown RBP17.91■□□□□ 0.46
TRIM39-205ENST00000396551 LOC285556D6RIA3 1793 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 OAZ1P54368 228 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 DMP1Q13316 513 aaPredicted RBP17.91■□□□□ 0.46
TRIM39-205ENST00000396551 KCTD19Q17RG1 926 aaPredicted RBP17.91■□□□□ 0.46
TRIM39-205ENST00000396551 CEP170P1Q96L14 293 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 KMT5AQ9NQR1 393 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 LTBP3Q9NS15 1303 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 SGPL1O95470 568 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 CHRNB2P17787 502 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 SMTNP53814 917 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 ALS2CLQ60I27 953 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
TRIM39-205ENST00000396551 NSUN6Q8TEA1 469 aaKnown RBP17.91■□□□□ 0.46
TRIM39-205ENST00000396551 PARD3BQ8TEW8 1205 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 HVCN1Q96D96 273 aa17.91■□□□□ 0.46
TRIM39-205ENST00000396551 ZIM3Q96PE6 472 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms