RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 IGBP1P78318 339 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 NR1D2Q14995 579 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ADRM1Q16186 407 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 LILRB1Q8NHL6 650 aaPredicted RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 XPO6Q96QU8 1125 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 DSCC1Q9BVC3 393 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 INTS13Q9NVM9 706 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 GPRC5DQ9NZD1 345 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 AKR1B15C9JRZ8 316 aaPredicted RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 FAM47E-STBD1D6RA91 191 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ATP9AO75110 1047 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 CSPG5O95196 566 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 CCNCP24863 283 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 CASP14P31944 242 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ETV3P41162 512 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 WASHC4Q2M389 1173 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 TWF2Q6IBS0 349 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 KIF2BQ8N4N8 673 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 CAPZA3Q96KX2 299 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 HEPHQ9BQS7 1158 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 RTFDC1Q9BY42 306 aaPredicted RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 TIMMDC1Q9NPL8 285 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 SEC31BQ9NQW1 1179 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 TYW1Q9NV66 732 aaKnown RBP9.54□□□□□ -0.88
MSH5-205ENST00000395853 CYP39A1Q9NYL5 469 aa9.54□□□□□ -0.88
MSH5-205ENST00000395853 ABCC12Q96J65 1359 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 FOXP2O15409 715 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 PDE8BO95263 885 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 PARNO95453 639 aaKnown RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 ZFYP08048 801 aaPredicted RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 TMOD1P28289 359 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 PPP4CP60510 307 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 MTMR3Q13615 1198 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 TUBA3CQ13748 450 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 ANKRD36BP1Q96IX9 119 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 ZNF333Q96JL9 665 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 KRT23Q9C075 422 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 PUS7LQ9H0K6 701 aaKnown RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 STK39Q9UEW8 545 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 HBS1LQ9Y450 684 aaKnown RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 NOTOA8MTQ0 251 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 ASAP2O43150 1006 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 UBOX5O94941 541 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 SLC3A2P08195 630 aaKnown RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 DDX5P17844 614 aaKnown RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 VAV2P52735 878 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 EMP3P54852 163 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 COPS2P61201 443 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 KIF23Q02241 960 aaPredicted RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 CYTH1Q15438 398 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 GSTA3Q16772 222 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 TRIM71Q2Q1W2 868 aaKnown RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 ZC3H18Q86VM9 953 aaKnown RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 RAB3IPQ96QF0 476 aaPredicted RBP9.53□□□□□ -0.88
MSH5-205ENST00000395853 FNBP1Q96RU3 617 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 RCOR1Q9UKL0 485 aa9.53□□□□□ -0.88
MSH5-205ENST00000395853 ANKRD62A6NC57 917 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 RASA4BC9J798 803 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 E7EWF7 191 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PSMD14O00487 310 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 RASA4O43374 803 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 JAK2O60674 1132 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 MZF1P28698 734 aaPredicted RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 CETN2P41208 172 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PHKA1P46020 1223 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 RXRGP48443 463 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 NOGQ13253 232 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PCSK7Q16549 785 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 CTC1Q2NKJ3 1217 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 CHST3Q7LGC8 479 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PATL1Q86TB9 770 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 RIBC1Q8N443 379 aaPredicted RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 ENDOVQ8N8Q3 282 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 RETREG2Q8NC44 543 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 CCSER1Q9C0I3 900 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PTTG2Q9NZH5 202 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 SAMD15Q9P1V8 674 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 STIM2Q9P246 746 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 ZNRF3Q9ULT6 936 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 DDX60Q8IY21 1712 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 A6NJR5 290 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 GCOM1H8Y6P7 765 aaPredicted RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 TRAF5O00463 557 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 ENC1O14682 589 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 AOC2O75106 756 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PEX11AO75192 247 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 CELF2O95319 508 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 ZBED1O96006 694 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 LMNAP02545 664 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 MYZAPP0CAP1 466 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PABPC4LP0CB38 370 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 CDK4P11802 303 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms