RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 MYBP10242 640 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 GNA11P29992 359 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 GBP2P32456 591 aaPredicted RBP17.78■□□□□ 0.44
SNCA-205ENST00000394991 B3GNT9Q6UX72 402 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 TAS1R1Q7RTX1 841 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 MIER3Q7Z3K6 550 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 MRPL10Q7Z7H8 261 aaKnown RBP17.78■□□□□ 0.44
SNCA-205ENST00000394991 KIAA2013Q8IYS2 634 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 SLC44A3Q8N4M1 653 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 URGCPQ8TCY9 931 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 PGBD4Q96DM1 585 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 NLRP4Q96MN2 994 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 TMEM175Q9BSA9 504 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 HERC2P3Q9BVR0 1158 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 INO80BQ9C086 356 aaPredicted RBP17.78■□□□□ 0.44
SNCA-205ENST00000394991 SEMA4AQ9H3S1 761 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 RSAD1Q9HA92 442 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 IFT122Q9HBG6 1241 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 EPS15L1Q9UBC2 864 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 FAN1Q9Y2M0 1017 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 FRYLO94915 3013 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 NID2Q14112 1375 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 EPG5Q9HCE0 2579 aa17.78■□□□□ 0.44
SNCA-205ENST00000394991 SPTBN2O15020 2390 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 COL4A3Q01955 1670 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 CCDC195A0A1B0GUA6 201 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 INPPL1O15357 1258 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 PRPF3O43395 683 aaKnown RBP17.77■□□□□ 0.44
SNCA-205ENST00000394991 MAFO75444 373 aaPredicted RBP17.77■□□□□ 0.44
SNCA-205ENST00000394991 RFPL2O75678 378 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 SOD2P04179 222 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 CPA1P15085 419 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 DNM2P50570 870 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 AK2P54819 239 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 UBXN11Q5T124 520 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 RDM1Q8NG50 284 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 PHKBQ93100 1093 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 RPS6KC1Q96S38 1066 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 RHOBTB2Q9BYZ6 727 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 DLGAP2Q9P1A6 1054 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 STK39Q9UEW8 545 aa17.77■□□□□ 0.44
SNCA-205ENST00000394991 TEX28O15482 410 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 EFEMP2O95967 443 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 POMCP01189 267 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 ALDH2P05091 517 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 URODP06132 367 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 DCNP07585 359 aaKnown RBP17.76■□□□□ 0.43
SNCA-205ENST00000394991 SRFP11831 508 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 PLA2G4FQ68DD2 849 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 POTEGQ6S5H5 508 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 DGLUCYQ7Z3D6 616 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 RNF168Q8IYW5 571 aaPredicted RBP17.76■□□□□ 0.43
SNCA-205ENST00000394991 GPR152Q8TDT2 470 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 ZNF707Q96C28 371 aaPredicted RBP17.76■□□□□ 0.43
SNCA-205ENST00000394991 VPS54Q9P1Q0 977 aa17.76■□□□□ 0.43
SNCA-205ENST00000394991 PRG3Q9Y2Y8 225 aaPredicted RBP17.76■□□□□ 0.43
SNCA-205ENST00000394991 CNTNAP2Q9UHC6 1331 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 DDX11L8A8MPP1 907 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 F8W810 466 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 TDP2O95551 362 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 GLUD1P00367 558 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 ADH1AP07327 375 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 RFX1P22670 979 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 USP11P51784 963 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 SPECC1Q5M775 1068 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 ANO5Q75V66 913 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 SMG7Q92540 1137 aaKnown RBP17.75■□□□□ 0.43
SNCA-205ENST00000394991 FAM193BQ96PV7 902 aaPredicted RBP17.75■□□□□ 0.43
SNCA-205ENST00000394991 MINDY3Q9H8M7 445 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 RXFP1Q9HBX9 757 aa17.75■□□□□ 0.43
SNCA-205ENST00000394991 PAPLNO95428 1278 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 SP9P0CG40 484 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 HOXA11P31270 313 aaPredicted RBP17.74■□□□□ 0.43
SNCA-205ENST00000394991 NONOQ15233 471 aaKnown RBP eCLIP17.74■□□□□ 0.43
SNCA-205ENST00000394991 NTRK3Q16288 839 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 Q4G0T1 1027 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 KIAA0319Q5VV43 1072 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 CYP26C1Q6V0L0 522 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 COLGALT2Q8IYK4 626 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 DCLK2Q8N568 766 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 STAMQ92783 540 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 ARHGEF3Q9NR81 526 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 COL4A3BPQ9Y5P4 624 aa17.74■□□□□ 0.43
SNCA-205ENST00000394991 POTEMA6NI47 508 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 SPATA31D3P0C874 917 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 GLULP15104 373 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 GLUD2P49448 558 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 NPEPPSP55786 919 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 PHLDB3Q6NSJ2 640 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 SPATA31D4Q6ZUB0 917 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 Q6ZUG5 572 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 ZNF579Q8NAF0 562 aaKnown RBP17.73■□□□□ 0.43
SNCA-205ENST00000394991 SMG8Q8ND04 991 aaKnown RBP17.73■□□□□ 0.43
SNCA-205ENST00000394991 ST13P5Q8NFI4 369 aaPredicted RBP17.73■□□□□ 0.43
SNCA-205ENST00000394991 ETNPPLQ8TBG4 499 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 TBCKQ8TEA7 893 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms