RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PPP4R3CPQ6ZMV5 832 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 FAM43BQ6ZT52 329 aaPredicted RBP21.96■■□□□ 1.11
SNCA-203ENST00000394986 MYCT1Q8N699 235 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 DNAJC19Q96DA6 116 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 EIF2AQ9BY44 585 aaKnown RBP21.96■■□□□ 1.11
SNCA-203ENST00000394986 GOLPH3LQ9H4A5 285 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 CERS4Q9HA82 394 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 C17orf75Q9HAS0 396 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 PARVGQ9HBI0 331 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 FAM105AQ9NUU6 356 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 TMEM161AQ9NX61 479 aa21.96■■□□□ 1.11
SNCA-203ENST00000394986 CHD9Q3L8U1 2897 aa21.95■■□□□ 1.11
SNCA-203ENST00000394986 TTC3P53804 2025 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.95■■□□□ 1.1
SNCA-203ENST00000394986 EFNA5P52803 228 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 TAP1Q03518 808 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 PCBP1Q15365 356 aaKnown RBP eCLIP21.95■■□□□ 1.1
SNCA-203ENST00000394986 FAM187BQ17R55 369 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 NOTUMQ6P988 496 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 ZNF598Q86UK7 904 aaKnown RBP21.95■■□□□ 1.1
SNCA-203ENST00000394986 FSIP1Q8NA03 581 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 SP7Q8TDD2 431 aaPredicted RBP21.95■■□□□ 1.1
SNCA-203ENST00000394986 SPIRE2Q8WWL2 714 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 LPPQ93052 612 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 ZNF689Q96CS4 500 aaPredicted RBP21.95■■□□□ 1.1
SNCA-203ENST00000394986 ZNF576Q9H609 170 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 RNF19AQ9NV58 838 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 LARSQ9P2J5 1176 aaKnown RBP21.95■■□□□ 1.1
SNCA-203ENST00000394986 SERTAD1Q9UHV2 236 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 HPSEQ9Y251 543 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 CNTNAP2Q9UHC6 1331 aa21.95■■□□□ 1.1
SNCA-203ENST00000394986 LINC01553A4QN01 128 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 MEIS3P2A8K0S8 358 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 K7ERI5 159 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 AXLP30530 894 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 NDUFA8P51970 172 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 PRPF4BQ13523 1007 aaKnown RBP21.94■■□□□ 1.1
SNCA-203ENST00000394986 DEFB123Q8N688 67 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 TMEM161BQ8NDZ6 487 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 PRIMPOLQ96LW4 560 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 IPO9Q96P70 1041 aaKnown RBP21.94■■□□□ 1.1
SNCA-203ENST00000394986 TRAIPQ9BWF2 469 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 TNMDQ9H2S6 317 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 SEMA6BQ9H3T3 888 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 CUEDC2Q9H467 287 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 ELAC1Q9H777 363 aaKnown RBP21.94■■□□□ 1.1
SNCA-203ENST00000394986 KBTBD4Q9NVX7 518 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 PCDHB2Q9Y5E7 798 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 PHLPP2Q6ZVD8 1323 aa21.94■■□□□ 1.1
SNCA-203ENST00000394986 A0A1W2PQ27 194 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 A0A1W2PQ64 194 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 A0A1W2PQD8 194 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 ACKR2O00590 384 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 IDEP14735 1019 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 CASP1P29466 404 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 SMTNP53814 917 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 NCKAP1LP55160 1127 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 NCBP1Q09161 790 aaKnown RBP21.93■■□□□ 1.1
SNCA-203ENST00000394986 TMEM132AQ24JP5 1023 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 NT5DC1Q5TFE4 455 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 GPR153Q6NV75 609 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 SFR1Q86XK3 245 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 GRAMD1CQ8IYS0 662 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 MRPS27Q92552 414 aaKnown RBP21.93■■□□□ 1.1
SNCA-203ENST00000394986 FIZ1Q96SL8 496 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 NTPCRQ9BSD7 190 aaKnown RBP21.93■■□□□ 1.1
SNCA-203ENST00000394986 PDZD7Q9H5P4 517 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 MTUS1Q9ULD2 1270 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 TCHHQ07283 1943 aa21.93■■□□□ 1.1
SNCA-203ENST00000394986 A0A1B0GUA9 196 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 K7ENM7 598 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 ACTN4O43707 911 aaKnown RBP21.92■■□□□ 1.1
SNCA-203ENST00000394986 NPTXRO95502 500 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 MAPTP10636 758 aaKnown RBP21.92■■□□□ 1.1
SNCA-203ENST00000394986 NMT1P30419 496 aaKnown RBP21.92■■□□□ 1.1
SNCA-203ENST00000394986 BTG3Q14201 252 aaPredicted RBP21.92■■□□□ 1.1
SNCA-203ENST00000394986 CLLU1OSQ5K130 101 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 EEF1DP3Q658K8 133 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 TMEM134Q9H6X4 195 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 HCSTQ9UBK5 93 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 HES2Q9Y543 173 aa21.92■■□□□ 1.1
SNCA-203ENST00000394986 TMEM265A0A087WTH1 108 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 FAM237AA0A1B0GTK4 181 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 TBKBP1A7MCY6 615 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 TRAK2O60296 914 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 AFMP43652 599 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 RAB27AP51159 221 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 GRIN2CQ14957 1233 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 SLC27A1Q6PCB7 646 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 HAUS6Q7Z4H7 955 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 SMG8Q8ND04 991 aaKnown RBP21.91■■□□□ 1.1
SNCA-203ENST00000394986 HELQQ8TDG4 1101 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 CCDC51Q96ER9 411 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 C17orf80Q9BSJ5 609 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 TRIM9Q9C026 710 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 BLZF1Q9H2G9 400 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 TBC1D7Q9P0N9 293 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 IPPQ9Y573 584 aa21.91■■□□□ 1.1
SNCA-203ENST00000394986 SYKP43405 635 aa21.9■■□□□ 1.1
SNCA-203ENST00000394986 ATF7IP2Q5U623 682 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms