RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 SREBF1P36956 1147 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 PSMC6P62333 389 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 TRIP13Q15645 432 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 GBP7Q8N8V2 638 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 DNAJC17Q9NVM6 304 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 AKAP11Q9UKA4 1901 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 H0YCG3 227 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 SHOX2O60902 331 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 CHN1P15882 459 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 LMNB2Q03252 620 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 UAP1Q16222 522 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 C6orf163Q5TEZ5 329 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 TBC1D1Q86TI0 1168 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 PARP9Q8IXQ6 854 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 RAB3IPQ96QF0 476 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 KCND2Q9NZV8 630 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 ITGA4P13612 1032 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 ACTN3Q08043 901 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 CYP4F22Q6NT55 531 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 PPP1R21Q6ZMI0 780 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 SH3GL2Q99962 352 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 TBK1Q9UHD2 729 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 SALL4Q9UJQ4 1053 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 MYH3P11055 1940 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 GAKO14976 1311 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 FGFR4P22455 802 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 SHMT1P34896 483 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 PRKCIP41743 596 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 IQCKQ8N0W5 287 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 GLG1Q92896 1179 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 SLC35C1Q96A29 364 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 OSGEPQ9NPF4 335 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.4
UBE2D3-209ENST00000394804 F8VZ95 297 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 TLR2O60603 784 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 RASSF2P50749 326 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 SLC12A3P55017 1021 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 KSR1Q8IVT5 923 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 ARHGEF2Q92974 986 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 TACO1Q9BSH4 297 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 THAP2Q9H0W7 228 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 OLFML3Q9NRN5 406 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 PRR12Q9ULL5 1215 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 COPB2P35606 906 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 ADCY1Q08828 1119 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 NFIAQ12857 509 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 MAPK7Q13164 816 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 PLCB4Q15147 1175 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 Q4G0T1 1027 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 GDAP1Q8TB36 358 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 MASTLQ96GX5 879 aa12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 PABPC3Q9H361 631 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 PPP1R1BQ9UD71 204 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-209ENST00000394804 BTNL10A8MVZ5 291 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 DDX3XO00571 662 aaKnown RBP eCLIP12.51□□□□□ -0.412e-17■■■■□ 23.8
UBE2D3-209ENST00000394804 PIK3CAP42336 1068 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 ZNF844Q08AG5 666 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 ZNF572Q7Z3I7 529 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CCDC89Q8N998 374 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 RAPGEF5Q92565 580 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 POC1B-GALNT4F8VUJ3 575 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 TMED2Q15363 201 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 KAZNQ674X7 775 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 MRPL47Q9HD33 250 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 HAUS2Q9NVX0 235 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 RASSF10A6NK89 507 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 SLC16A4O15374 487 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 RPSAP08865 295 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CAV1Q03135 178 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 TRPC3Q13507 836 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 ECM1Q16610 540 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 KRT39Q6A163 491 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 NT5DC3Q86UY8 548 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 PPP1R14CQ8TAE6 165 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 DEPTORQ8TB45 409 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 KCTD10Q9H3F6 313 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 SLC40A1Q9NP59 571 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 KCNMB3Q9NPA1 279 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 COMTP21964 271 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CASP5P51878 434 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 SLC29A2Q14542 456 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
UBE2D3-209ENST00000394804 TMC3Q7Z5M5 1100 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms