RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RPA1P27694 616 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 STX2P32856 288 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 RPS6P62753 249 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 CYP27A1Q02318 531 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 KIF22Q14807 665 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 EXOC3L4Q17RC7 722 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TMEM154Q6P9G4 183 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 CROCCP2Q86T23 111 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 MTMR14Q8NCE2 650 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 C3orf20Q8ND61 904 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 UHMK1Q8TAS1 419 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 CTNNBL1Q8WYA6 563 aaPredicted RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 POMGNT1Q8WZA1 660 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 ARL8AQ96BM9 186 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 CCDC77Q9BR77 488 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 NDST4Q9H3R1 872 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 SEL1LQ9UBV2 794 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 INTUQ9ULD6 942 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 ZNF711Q9Y462 761 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 COL1A1P02452 1464 aaPredicted RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 MYMKA6NI61 221 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 IRF6O14896 467 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TEX33O43247 280 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 SLC25A27O95847 323 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 KRT5P13647 590 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 STAT1P42224 750 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 SCTRP47872 440 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 RPS6KA3P51812 740 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 POLR2FP61218 127 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 PPP2R2AP63151 447 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TFDP1Q14186 410 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 SWSAP1Q6NVH7 229 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 ADSSL1Q8N142 457 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 TAAR1Q96RJ0 339 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 LRRC1Q9BTT6 524 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 IQCGQ9H095 443 aaKnown RBP6.11□□□□□ -1.43
RFFL-202ENST00000394597 DPH5Q9H2P9 285 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 DLGAP2Q9P1A6 1054 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 GABBR1Q9UBS5 961 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 C15orf41Q9Y2V0 281 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 L3MBTL1Q9Y468 752 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 BTAF1O14981 1849 aa6.11□□□□□ -1.43
RFFL-202ENST00000394597 MSH4O15457 936 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ATP5DP30049 168 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 PEX3P56589 373 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 DEUP1Q05D60 604 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 RPS6KA1Q15418 735 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ARHGAP44Q17R89 818 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 TEX9Q8N6V9 391 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 MCPH1Q8NEM0 835 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 CHMP6Q96FZ7 201 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ZIM3Q96PE6 472 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 NAP1L3Q99457 506 aaPredicted RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 TMEM165Q9HC07 324 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 UBR2Q8IWV8 1755 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 PHF20L1A8MW92 1017 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 HNRNPDLO14979 420 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 ATP6V1G2O95670 118 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 MMEP08473 750 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 AARSP49588 968 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFFL-202ENST00000394597 MAGOHP61326 146 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 IGBP1P78318 339 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 KNOP1Q1ED39 458 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 Q4G0T1 1027 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 KCNV1Q6PIU1 500 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 PAF1Q8N7H5 531 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 MORC4Q8TE76 937 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 MAGOHBQ96A72 148 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 CCDC127Q96BQ5 260 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 POLR3CQ9BUI4 534 aaPredicted RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 SLC9A2Q9UBY0 812 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ABT1Q9ULW3 272 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 NID2Q14112 1375 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ASB14A6NK59 587 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 KCNK3O14649 394 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 TPD52L2O43399 206 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 CIB2O75838 187 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 SYF2O95926 243 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 TFRCP02786 760 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 SNHG28P0DPA3 235 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 CNGA1P29973 690 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ZBED6P86452 979 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 FMR1Q06787 632 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFFL-202ENST00000394597 GLE1Q53GS7 698 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 SH3BP5LQ7L8J4 393 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 NKX2-3Q8TAU0 364 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ZNF483Q8TF39 744 aaPredicted RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 GTF3C2Q8WUA4 911 aaPredicted RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 FAM167AQ96KS9 214 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 CENPKQ9BS16 269 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 PLVAPQ9BX97 442 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 AP5M1Q9H0R1 490 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 PCIF1Q9H4Z3 704 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 SYNCQ9H7C4 482 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ZNF302Q9NR11 478 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 KCNH7Q9NS40 1196 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ABHD10Q9NUJ1 306 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 LGALS16A8MUM7 142 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ZNF185O15231 689 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 AHCYL1O43865 530 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms