RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 DGCR14Q96DF8 476 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 MAELQ96JY0 434 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 ZKSCAN3Q9BRR0 538 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 LIN28AQ9H9Z2 209 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 STX18Q9P2W9 335 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 NOX1Q9Y5S8 564 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 A0A087X0T9 212 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 MYOCOSA0A1B0GUC4 107 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 MAPK13O15264 365 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 STAMBPO95630 424 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 FAM228BP0C875 321 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 TAC1P20366 129 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 SEPT7Q16181 437 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 ASTE1Q2TB18 679 aaPredicted RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 METTL21CQ5VZV1 264 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 C1orf228Q6PIY5 440 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 MTDHQ86UE4 582 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 ZDHHC18Q9NUE0 388 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 TUBA8Q9NY65 449 aaPredicted RBP13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
SLC28A1-203ENST00000394573 CPDO75976 1380 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 FGGP02679 453 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 RCVRNP35243 200 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 STT3AP46977 705 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 KLRC3Q07444 240 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 PPIDQ08752 370 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 PTGDRQ13258 359 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 TMEM266Q2M3C6 531 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 VPS52Q8N1B4 723 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 ARHGAP24Q8N264 748 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 SLC25A41Q8N5S1 370 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 MRGBPQ9NV56 204 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 DDX43Q9NXZ2 648 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 FBXO9Q9UK97 447 aaPredicted RBP13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 RXRBP28702 533 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 TCIRG1Q13488 830 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 RAPH1Q70E73 1250 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 EYA1Q99502 592 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 EIF2AQ9BY44 585 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 FOXP1Q9H334 677 aaPredicted RBP13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 ZFP69BQ9UJL9 534 aa13.39□□□□□ -0.27
SLC28A1-203ENST00000394573 CFAP69A5D8W1 941 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 BHMG1C9JSJ3 638 aaPredicted RBP13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 HNRNPH3P31942 346 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 CPA2P48052 419 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 TRPC1P48995 793 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 LRP8Q14114 963 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 SRRM1Q8IYB3 904 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 ZBED8Q8IZ13 594 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 BAP1Q92560 729 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 KLHL4Q9C0H6 718 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 IL1RAPL1Q9NZN1 696 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 SIK3Q9Y2K2 1263 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 GYG2O15488 501 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 TLR2O60603 784 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 DR1Q01658 176 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 C16orf72Q14CZ0 275 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 ZDHHC24Q6UX98 284 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 ACTRT1Q8TDG2 376 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 SH3RF3Q8TEJ3 882 aaPredicted RBP13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 ERGIC2Q96RQ1 377 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 PUS7LQ9H0K6 701 aaKnown RBP13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 ERVK-5Q9HDB9 667 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 UBN1Q9NPG3 1134 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 DCTN4Q9UJW0 460 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 PHTF1Q9UMS5 762 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 LZTS1Q9Y250 596 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 PFASO15067 1338 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
SLC28A1-203ENST00000394573 FOXD2O60548 495 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 EIF2B2P49770 351 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 YARSP54577 528 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 LPIN1Q14693 890 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 GPR162Q16538 588 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 NADK2Q4G0N4 442 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 ZNF394Q53GI3 561 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 RASSF3Q86WH2 238 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 SHISA4Q96DD7 197 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 PRR11Q96HE9 360 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 CEP44Q9C0F1 390 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 KANSL2Q9H9L4 492 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms