RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.92□□□□□ -1.78
XRN1-202ENST00000392981 EFHBQ8N7U6 833 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 LSMEM1Q8N8F7 131 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 USP6NLQ92738 828 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 MRGPRX2Q96LB1 330 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 PIGSQ96S52 555 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 PAIP1Q9H074 479 aaKnown RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 CHODLQ9H9P2 273 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 LRRC4BQ9NT99 713 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CALCOCO1Q9P1Z2 691 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CEP72Q9P209 647 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 MAN2B2Q9Y2E5 1009 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 GGT5P36269 586 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CTSOP43234 321 aaPredicted RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 FXR1P51114 621 aaKnown RBP eCLIP3.92□□□□□ -1.78
XRN1-202ENST00000392981 MAMLD1Q13495 774 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 DCTN1Q14203 1278 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 RCN2Q14257 317 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 C3orf38Q5JPI3 329 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 DACT2Q5SW24 774 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 HECTD3Q5T447 861 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 INTS3Q68E01 1043 aaKnown RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 CNSTQ6PJW8 725 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 ADAMTSL4Q6UY14 1074 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 COL23A1Q86Y22 540 aaPredicted RBP3.92□□□□□ -1.78
XRN1-202ENST00000392981 BRSK2Q8IWQ3 736 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 TRIM59Q8IWR1 403 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CDADC1Q9BWV3 514 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 JMJD4Q9H9V9 463 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 PREBQ9HCU5 417 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 ATP8A2Q9NTI2 1148 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 CPNE7Q9UBL6 633 aa3.92□□□□□ -1.78
XRN1-202ENST00000392981 LINC01387J3KSC0 135 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 PPFIA2O75334 1257 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ATF7P17544 494 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 RNF4P78317 190 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 EIF2B5Q13144 721 aaKnown RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 CUL4BQ13620 913 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ATPAF1Q5TC12 328 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 SLC6A19Q695T7 634 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 JMJD6Q6NYC1 403 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 ARHGAP27Q6ZUM4 889 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 TMEM102Q8N9M5 508 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 STYXQ8WUJ0 223 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 CCDC140Q96MF4 163 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ACAP3Q96P50 834 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 UIMC1Q96RL1 719 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 NELL2Q99435 816 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ELF4Q99607 663 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 ABCF3Q9NUQ8 709 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 EYA2O00167 538 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ATE1O95260 518 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 NDST3O95803 873 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 MT-ND3P03897 115 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ITGA2BP08514 1039 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 JUPP14923 745 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 MAPK3P27361 379 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 TMOD1P28289 359 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 RGS3P49796 1198 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 GALEQ14376 348 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ARHGAP44Q17R89 818 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 MAEAQ7L5Y9 396 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 CHST15Q7LFX5 561 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 GALNT7Q86SF2 657 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 VPS33AQ96AX1 596 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 TSEN34Q9BSV6 310 aaKnown RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 GPR63Q9BZJ6 419 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 SUDS3Q9H7L9 328 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 B4GALT6Q9UBX8 382 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 CCDC69A6NI79 296 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 H3BML4 177 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 FOXN3O00409 490 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 FTCDO95954 541 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 TGFB3P10600 412 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 EIF2DP41214 584 aaKnown RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 LGALS4P56470 323 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ERVK-21P61565 698 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 PDCLQ13371 301 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 SEMA3AQ14563 771 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 NRSN1Q8IZ57 195 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 SLC30A5Q8TAD4 765 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 HDAC10Q969S8 669 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 POMT1Q9Y6A1 747 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 NPHP3-ACAD11A0A0J9YXS1 232 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 KLRG2A4D1S0 409 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 URI1O94763 535 aaPredicted RBP3.91□□□□□ -1.78
XRN1-202ENST00000392981 CBX7O95931 251 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 RAB6AP20340 208 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 CD40P25942 277 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 MCM7P33993 719 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 RXRGP48443 463 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 EVX2Q03828 476 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 DUSP4Q13115 394 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 FGL2Q14314 439 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ARHGAP15Q53QZ3 475 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 FIGNL1Q6PIW4 674 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 SPOCD1Q6ZMY3 1216 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 ARHGAP36Q6ZRI8 547 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 CYP4X1Q8N118 509 aa3.91□□□□□ -1.78
XRN1-202ENST00000392981 NRG4Q8WWG1 115 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms