RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 TRAF3IP3Q9Y228 551 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 ZBTB48P10074 688 aaPredicted RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 SARNPP82979 210 aaKnown RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.23■□□□□ 0.191e-6■□□□□ 11.2
SHTN1-204ENST00000392903 PACSIN1Q9BY11 444 aa16.23■□□□□ 0.19
SHTN1-204ENST00000392903 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
SHTN1-204ENST00000392903 DAPK3O43293 454 aa16.22■□□□□ 0.19
SHTN1-204ENST00000392903 CEP104O60308 925 aa16.22■□□□□ 0.19
SHTN1-204ENST00000392903 DHX9Q08211 1270 aaKnown RBP16.22■□□□□ 0.19
SHTN1-204ENST00000392903 POTEAQ6S8J7 498 aa16.22■□□□□ 0.19
SHTN1-204ENST00000392903 PNMA8AQ86V59 439 aaPredicted RBP16.22■□□□□ 0.19
SHTN1-204ENST00000392903 CPXCR1Q8N123 301 aa16.22■□□□□ 0.19
SHTN1-204ENST00000392903 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
SHTN1-204ENST00000392903 SPATS2LQ9NUQ6 558 aaKnown RBP16.22■□□□□ 0.19
SHTN1-204ENST00000392903 PCDHB13Q9Y5F0 798 aa16.22■□□□□ 0.19
SHTN1-204ENST00000392903 ASTN1O14525 1302 aa16.22■□□□□ 0.19
SHTN1-204ENST00000392903 PDXKO00764 312 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 PPFIA2O75334 1257 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 NR3C1P04150 777 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 TRAF1Q13077 416 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 C10orf76Q5T2E6 689 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 TRPM8Q7Z2W7 1104 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 HOOK3Q86VS8 718 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 SLC5A5Q92911 643 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 AP1M1Q9BXS5 423 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 TXLNGYQ9BZA5 131 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 FAM114A2Q9NRY5 505 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 HOMER3Q9NSC5 361 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 RGS17Q9UGC6 210 aaPredicted RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 ADAMTS1Q9UHI8 967 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 NOC2LQ9Y3T9 749 aaKnown RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 L3MBTL1Q9Y468 752 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 PSME4Q14997 1843 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 LIN7AO14910 233 aaPredicted RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 CALUO43852 315 aaPredicted RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 FAM13AO94988 1023 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 EGFRP00533 1210 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 MMEP08473 750 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 XRCC5P13010 732 aaKnown RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 MMP13P45452 471 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 TRMT1LQ7Z2T5 733 aaKnown RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 TBC1D1Q86TI0 1168 aaPredicted RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 ZC3H3Q8IXZ2 948 aaKnown RBP16.21■□□□□ 0.19
SHTN1-204ENST00000392903 LRRC57Q8N9N7 239 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 CCDC26Q8TAB7 109 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 AGAP11Q8TF27 550 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 UNC45AQ9H3U1 944 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 LRRC4CQ9HCJ2 640 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 HOMER2Q9NSB8 354 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 AIPL1Q9NZN9 384 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 CCPG1Q9ULG6 757 aa16.21■□□□□ 0.19
SHTN1-204ENST00000392903 SMNDC1O75940 238 aaKnown RBP eCLIP16.2■□□□□ 0.18
SHTN1-204ENST00000392903 CHN1P15882 459 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 PRELPP51888 382 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 INHBEP58166 350 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 PPP2R5CQ13362 524 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 IFI16Q16666 785 aaKnown RBP16.2■□□□□ 0.18
SHTN1-204ENST00000392903 C1orf186Q6ZWK4 172 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 ZNF570Q96NI8 536 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 CCDC134Q9H6E4 229 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 FEM1BQ9UK73 627 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 KLHL33A6NCF5 533 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 IPO5O00410 1097 aaKnown RBP16.2■□□□□ 0.18
SHTN1-204ENST00000392903 KRIT1O00522 736 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 NFIBO00712 420 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 TBC1D12O60347 775 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 CAND2O75155 1236 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 ASNSP08243 561 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 KLHL30Q0D2K2 578 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 RASA3Q14644 834 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 COG2Q14746 738 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 CAPRIN2Q6IMN6 1127 aaKnown RBP16.2■□□□□ 0.18
SHTN1-204ENST00000392903 MAEAQ7L5Y9 396 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 RASGEF1CQ8N431 466 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 PGM2Q96G03 612 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 SH3GL3Q99963 347 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 TUFT1Q9NNX1 390 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 TYW1Q9NV66 732 aaKnown RBP16.2■□□□□ 0.18
SHTN1-204ENST00000392903 SAMD15Q9P1V8 674 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 CORO1CQ9ULV4 474 aaPredicted RBP16.2■□□□□ 0.18
SHTN1-204ENST00000392903 ATAD5Q96QE3 1844 aa16.2■□□□□ 0.18
SHTN1-204ENST00000392903 TGFB1I1O43294 461 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 AFPP02771 609 aaKnown RBP16.19■□□□□ 0.18
SHTN1-204ENST00000392903 GRIPAP1Q4V328 841 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 MIS18BP1Q6P0N0 1132 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 FAM83AQ86UY5 434 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 FAM160B2Q86V87 743 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 METTL13Q8N6R0 699 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 AGBL3Q8NEM8 1001 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 GANQ9H2C0 597 aa16.19■□□□□ 0.18
SHTN1-204ENST00000392903 KIF9Q9HAQ2 790 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms