RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 TTLL12Q14166 644 aaPredicted RBP20.11■□□□□ 0.81
STRADB-202ENST00000392249 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 WDR93Q6P2C0 686 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 SLC39A4Q6P5W5 647 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 ARHGEF19Q8IW93 802 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 PROCA1Q8NCQ7 364 aaPredicted RBP20.11■□□□□ 0.81
STRADB-202ENST00000392249 CCDC127Q96BQ5 260 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 TMEM117Q9H0C3 514 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 ZNF302Q9NR11 478 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 FOXN3O00409 490 aaPredicted RBP20.11■□□□□ 0.81
STRADB-202ENST00000392249 P4HA2O15460 535 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 H2AFZP0C0S5 128 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 YBX3P16989 372 aaKnown RBP eCLIP20.11■□□□□ 0.814e-9■□□□□ 9.3
STRADB-202ENST00000392249 ATP4AP20648 1035 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 MEI1Q5TIA1 1274 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 H2AFVQ71UI9 128 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 ZNF572Q7Z3I7 529 aaPredicted RBP20.11■□□□□ 0.81
STRADB-202ENST00000392249 ERO1BQ86YB8 467 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 ASCC2Q9H1I8 757 aaPredicted RBP20.11■□□□□ 0.81
STRADB-202ENST00000392249 R3HDMLQ9H3Y0 253 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 SUGCTQ9HAC7 445 aa20.11■□□□□ 0.81
STRADB-202ENST00000392249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.11■□□□□ 0.81
STRADB-202ENST00000392249 HNRNPDLO14979 420 aaKnown RBP20.1■□□□□ 0.81
STRADB-202ENST00000392249 TUBBP07437 444 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 UBA1P22314 1058 aaKnown RBP20.1■□□□□ 0.81
STRADB-202ENST00000392249 RFX1P22670 979 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 POLGP54098 1239 aaPredicted RBP20.1■□□□□ 0.81
STRADB-202ENST00000392249 EMC2Q15006 297 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 ANKRD13AQ8IZ07 590 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 SPATA4Q8NEY3 305 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 SLC30A5Q8TAD4 765 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 POMGNT1Q8WZA1 660 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 CDCA5Q96FF9 252 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 MS4A14Q96JA4 679 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 IFT74Q96LB3 600 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 GOLPH3Q9H4A6 298 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 DAAM1Q9Y4D1 1078 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 MAFBQ9Y5Q3 323 aaPredicted RBP20.1■□□□□ 0.81
STRADB-202ENST00000392249 FAM170AA1A519 330 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 TMCO5BA8MYB1 307 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 ATG7O95352 703 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 MATR3P43243 847 aaKnown RBP eCLIP20.1■□□□□ 0.81
STRADB-202ENST00000392249 MAP2K1Q02750 393 aaPredicted RBP20.1■□□□□ 0.81
STRADB-202ENST00000392249 SYT11Q9BT88 431 aa20.1■□□□□ 0.81
STRADB-202ENST00000392249 ZMYND10O75800 440 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 OATP04181 439 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 CCDC172P0C7W6 258 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 PAFAH1B1P43034 410 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 RTP1P59025 263 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 EEPD1Q7L9B9 569 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 TAS1R3Q7RTX0 852 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 FMNL3Q8IVF7 1028 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 BICD1Q96G01 975 aa20.09■□□□□ 0.81
STRADB-202ENST00000392249 POP1Q99575 1024 aaKnown RBP20.09■□□□□ 0.81
STRADB-202ENST00000392249 TARSL2A2RTX5 802 aaKnown RBP20.08■□□□□ 0.81
STRADB-202ENST00000392249 GALCP54803 685 aa20.08■□□□□ 0.81
STRADB-202ENST00000392249 PARD3BQ8TEW8 1205 aa20.08■□□□□ 0.81
STRADB-202ENST00000392249 TMEM143Q96AN5 459 aa20.08■□□□□ 0.81
STRADB-202ENST00000392249 SEPT11Q9NVA2 429 aaKnown RBP20.08■□□□□ 0.81
STRADB-202ENST00000392249 ARHGAP28Q9P2N2 729 aa20.08■□□□□ 0.81
STRADB-202ENST00000392249 SPDYE5A6NIY4 337 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 LRRIQ3A6PVS8 624 aaPredicted RBP20.08■□□□□ 0.8
STRADB-202ENST00000392249 CNMDO75829 334 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 FARP2O94887 1054 aaPredicted RBP20.08■□□□□ 0.8
STRADB-202ENST00000392249 EDNRBP24530 442 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 NF2P35240 595 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 ITIH3Q06033 890 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 KIF22Q14807 665 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 IFI16Q16666 785 aaKnown RBP20.08■□□□□ 0.8
STRADB-202ENST00000392249 PTPROQ16827 1216 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 MMGT1Q8N4V1 131 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 KAT5Q92993 513 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 SYT17Q9BSW7 474 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 TOPORSQ9NS56 1045 aaPredicted RBP20.08■□□□□ 0.8
STRADB-202ENST00000392249 L1RE1Q9UN81 338 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 ATP8B3O60423 1300 aa20.08■□□□□ 0.8
STRADB-202ENST00000392249 CFAP221Q4G0U5 840 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 PALB2Q86YC2 1186 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 LRRC57Q8N9N7 239 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 TXNRD2Q9NNW7 524 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 INTUQ9ULD6 942 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 CXCL11O14625 94 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 MAP2K7O14733 419 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 BRDTQ58F21 947 aaPredicted RBP20.07■□□□□ 0.8
STRADB-202ENST00000392249 TPCN2Q8NHX9 752 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 SEMA4DQ92854 862 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 FBXL18Q96ME1 805 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 HINFPQ9BQA5 517 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 AGTPBP1Q9UPW5 1226 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 USP20Q9Y2K6 914 aa20.07■□□□□ 0.8
STRADB-202ENST00000392249 GSTTP1A0A1W2PQM5 241 aa20.06■□□□□ 0.8
STRADB-202ENST00000392249 PGK2P07205 417 aa20.06■□□□□ 0.8
STRADB-202ENST00000392249 TNFAIP3P21580 790 aa20.06■□□□□ 0.8
STRADB-202ENST00000392249 MRPS25P82663 173 aaKnown RBP20.06■□□□□ 0.8
STRADB-202ENST00000392249 KRT39Q6A163 491 aa20.06■□□□□ 0.8
STRADB-202ENST00000392249 CCDC70Q6NSX1 233 aa20.06■□□□□ 0.8
STRADB-202ENST00000392249 HDXQ7Z353 690 aa20.06■□□□□ 0.8
STRADB-202ENST00000392249 PPM1KQ8N3J5 372 aa20.06■□□□□ 0.8
STRADB-202ENST00000392249 SLC20A1Q8WUM9 679 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms