RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CEP83Q9Y592 693 aa8.3□□□□□ -1.08
TRBV28-201ENST00000390400 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 RLFQ13129 1914 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 PTPDC1A2A3K4 754 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 PDHXO00330 501 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 JAK2O60674 1132 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 KINO60870 393 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 CTDNEP1O95476 244 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 TBC1D8O95759 1140 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 HSPA6P17066 643 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 OAS2P29728 719 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 INHBEP58166 350 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 HTRA3P83110 453 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 COG2Q14746 738 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 NTRK3Q16288 839 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 SLC35G1Q2M3R5 365 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 E4F1Q66K89 784 aaPredicted RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 OTUD7BQ6GQQ9 843 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 GPAT2Q6NUI2 795 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 LLGL2Q6P1M3 1020 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 ELMSAN1Q6PJG2 1045 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 RSRC2Q7L4I2 434 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 HDXQ7Z353 690 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 NBPF11Q86T75 865 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 ADGRF4Q8IZF3 695 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 PRPF38AQ8NAV1 312 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 NSUN7Q8NE18 718 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 PHKBQ93100 1093 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 RRP36Q96EU6 259 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 PARK7Q99497 189 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 RNF26Q9BY78 433 aaPredicted RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 ASCC2Q9H1I8 757 aaPredicted RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 CPVLQ9H3G5 476 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 VAT1LQ9HCJ6 419 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 ZCCHC17Q9NP64 241 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 ST7Q9NRC1 585 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 FBXO28Q9NVF7 368 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 HOXC10Q9NYD6 342 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 SEC63Q9UGP8 760 aaKnown RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 ADAM21Q9UKJ8 722 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 RCOR1Q9UKL0 485 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 RAB21Q9UL25 225 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 MSRB2Q9Y3D2 182 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 CTDP1Q9Y5B0 961 aaPredicted RBP8.29□□□□□ -1.08
TRBV28-201ENST00000390400 MYPNQ86TC9 1320 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 STK36Q9NRP7 1315 aa8.29□□□□□ -1.08
TRBV28-201ENST00000390400 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
TRBV28-201ENST00000390400 CYTH3O43739 400 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 AOC2O75106 756 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 ZBED4O75132 1171 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 PPFIA4O75335 1185 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 KIF23Q02241 960 aaPredicted RBP8.28□□□□□ -1.08
TRBV28-201ENST00000390400 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 CDC37Q16543 378 aaPredicted RBP8.28□□□□□ -1.08
TRBV28-201ENST00000390400 ERCC6LQ2NKX8 1250 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 HSP90B2PQ58FF3 399 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 GDF6Q6KF10 455 aaPredicted RBP8.28□□□□□ -1.08
TRBV28-201ENST00000390400 PSAPL1Q6NUJ1 521 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 TXNDC11Q6PKC3 985 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 GBP6Q6ZN66 633 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 HOMER1Q86YM7 354 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 LILRB2Q8N423 598 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 MB21D1Q8N884 522 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 MSANTD4Q8NCY6 345 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 BICD2Q8TD16 824 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 NUDT8Q8WV74 236 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 WASF1Q92558 559 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 ATG4CQ96DT6 458 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 MTMR8Q96EF0 704 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 DEPDC7Q96QD5 511 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 PIGSQ96S52 555 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 PTPN18Q99952 460 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 FUT8Q9BYC5 575 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 NRSN2Q9GZP1 204 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 RIOX1Q9H6W3 641 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 JMJD4Q9H9V9 463 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 MYO1AQ9UBC5 1043 aa8.28□□□□□ -1.08
TRBV28-201ENST00000390400 COL11A1P12107 1806 aaPredicted RBP8.28□□□□□ -1.08
TRBV28-201ENST00000390400 SMCHD1A6NHR9 2005 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 hCG_1642624A0A1W2PR95 340 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 CCDC85CA6NKD9 419 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SRRM3A6NNA2 597 aaPredicted RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 IGF2BP3O00425 579 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 VWA5AO00534 786 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 TM4SF5O14894 197 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 ZBTB5O15062 677 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 STX10O60499 249 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 DEXIO95424 95 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SCG2P13521 617 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 LIG1P18858 919 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 MAP2K2P36507 400 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 TM4SF4P48230 202 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SNAP25P60880 206 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 HERVK_113P62684 666 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 SETQ01105 290 aaPredicted RBP8.27□□□□□ -1.09
TRBV28-201ENST00000390400 TRAF1Q13077 416 aa8.27□□□□□ -1.09
TRBV28-201ENST00000390400 QRICH1Q2TAL8 776 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms