RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 Q9H521 79 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 ZFATQ9P243 1243 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 MAD1L1Q9Y6D9 718 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 KLRC4O43908 158 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 PPP2R5CQ13362 524 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 HSP90AA5PQ58FG0 334 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 C1orf146Q5VVC0 180 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 GINM1Q9NU53 330 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 FAM196BA6NMK8 535 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 AGPSO00116 658 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 UBTFL6P0CB48 400 aaPredicted RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 FXR2P51116 673 aaKnown RBP eCLIP15.23■□□□□ 0.037e-6■■■■□ 23.7
RTF1-201ENST00000389629 POMGNT1Q8WZA1 660 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 NAF1Q96HR8 494 aaKnown RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 PDXKO00764 312 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 NTSR2O95665 410 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 MRPS35P82673 323 aaKnown RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 DNAJC3Q13217 504 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 PPP4R1Q8TF05 950 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 REEP2Q9BRK0 252 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 TUBB6Q9BUF5 446 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 NUF2Q9BZD4 464 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 NPHS2Q9NP85 383 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 GDF3Q9NR23 364 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 CAMTA2O94983 1202 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 KITP10721 976 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 NKX1-1Q15270 411 aaPredicted RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 QRICH1Q2TAL8 776 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 PYROXD1Q8WU10 500 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 CNOT8Q9UFF9 292 aaKnown RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 GOLGA8RI6L899 631 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 EPHB1P54762 984 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 BASP1P80723 227 aaKnown RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 LMNB2Q03252 620 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 ABCB5Q2M3G0 1257 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 MIIPQ5JXC2 388 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 ZNF564Q8TBZ8 553 aaPredicted RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 ACCSQ96QU6 501 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 NUP85Q9BW27 656 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 SUCLA2Q9P2R7 463 aaPredicted RBP15.23■□□□□ 0.03
RTF1-201ENST00000389629 HAO1Q9UJM8 370 aa15.23■□□□□ 0.03
RTF1-201ENST00000389629 ITGB3BPQ13352 177 aaPredicted RBP15.22■□□□□ 0.03
RTF1-201ENST00000389629 PAPOLBQ9NRJ5 636 aaKnown RBP15.22■□□□□ 0.03
RTF1-201ENST00000389629 ARFIP2P53365 341 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 EDRF1Q3B7T1 1238 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 ZNF571Q7Z3V5 609 aaPredicted RBP15.22■□□□□ 0.03
RTF1-201ENST00000389629 YTHDF3Q7Z739 585 aaKnown RBP15.22■□□□□ 0.03
RTF1-201ENST00000389629 AGGF1Q8N302 714 aaeCLIP15.22■□□□□ 0.034e-6■□□□□ 10.2
RTF1-201ENST00000389629 GRAMD1AQ96CP6 724 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 UBN1Q9NPG3 1134 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 SIK3Q9Y2K2 1263 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 F8VZ95 297 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 TPD52P55327 224 aaPredicted RBP15.22■□□□□ 0.03
RTF1-201ENST00000389629 IFI35P80217 286 aaPredicted RBP15.22■□□□□ 0.03
RTF1-201ENST00000389629 MAP3K21Q5TCX8 1036 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 VTI1AQ96AJ9 217 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 FAM118BQ9BPY3 351 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 UBXN6Q9BZV1 441 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 ABCB11O95342 1321 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 AP1G2O75843 785 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 RIC1Q4ADV7 1423 aa15.22■□□□□ 0.03
RTF1-201ENST00000389629 PALM3A6NDB9 673 aaPredicted RBP15.21■□□□□ 0.03
RTF1-201ENST00000389629 KRT1P04264 644 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 MKRN3Q13064 507 aaKnown RBP15.21■□□□□ 0.03
RTF1-201ENST00000389629 GRAPQ13588 217 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 ITIH4Q14624 930 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 MDH1BQ5I0G3 518 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 NXNQ6DKJ4 435 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.03
RTF1-201ENST00000389629 AGAP11Q8TF27 550 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
RTF1-201ENST00000389629 CD209Q9NNX6 404 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 CLDN3O15551 220 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 CACNB3P54284 484 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 ATP2A3Q93084 1043 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
RTF1-201ENST00000389629 PHF2O75151 1096 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 TOM1L1O75674 476 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 RCSD1Q6JBY9 416 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 TEX9Q8N6V9 391 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 C18orf8Q96DM3 657 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 AGPAT1Q99943 283 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 SEMA4AQ9H3S1 761 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 ABCF3Q9NUQ8 709 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 PITPNM2Q9BZ72 1349 aa15.21■□□□□ 0.03
RTF1-201ENST00000389629 WTIPA6NIX2 430 aaPredicted RBP15.21■□□□□ 0.02
RTF1-201ENST00000389629 SNUPNO95149 360 aaKnown RBP15.21■□□□□ 0.02
RTF1-201ENST00000389629 ALDH5A1P51649 535 aaPredicted RBP15.21■□□□□ 0.02
RTF1-201ENST00000389629 PPP1R18Q6NYC8 613 aa15.21■□□□□ 0.02
RTF1-201ENST00000389629 CENPUQ71F23 418 aa15.21■□□□□ 0.02
RTF1-201ENST00000389629 ALG6Q9Y672 507 aa15.21■□□□□ 0.02
RTF1-201ENST00000389629 PJA2O43164 708 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 TMPRSS15P98073 1019 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 KCNMA1Q12791 1236 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 GLIS3Q8NEA6 775 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 SNF8Q96H20 258 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 SH3GL2Q99962 352 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms