RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 MTHFRP42898 656 aa29.47■■■□□ 2.31
NPHP3-202ENST00000383282 AK2P54819 239 aa29.47■■■□□ 2.31
NPHP3-202ENST00000383282 CYP4A11Q02928 519 aa29.47■■■□□ 2.31
NPHP3-202ENST00000383282 CTTNQ14247 550 aaKnown RBP29.47■■■□□ 2.31
NPHP3-202ENST00000383282 AUTS2Q8WXX7 1259 aa29.47■■■□□ 2.31
NPHP3-202ENST00000383282 PRRX2Q99811 253 aa29.47■■■□□ 2.31
NPHP3-202ENST00000383282 ERLIN2O94905 339 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 SLC11A1P49279 550 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 EARS2Q5JPH6 523 aaKnown RBP29.46■■■□□ 2.31
NPHP3-202ENST00000383282 AGMOQ6ZNB7 445 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 MRPL10Q7Z7H8 261 aaKnown RBP29.46■■■□□ 2.31
NPHP3-202ENST00000383282 FERMT3Q86UX7 667 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 TPH2Q8IWU9 490 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 FBXL6Q8N531 539 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 MINDY3Q9H8M7 445 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 DNAJB4Q9UDY4 337 aa29.46■■■□□ 2.31
NPHP3-202ENST00000383282 DTNBO60941 627 aa29.45■■■□□ 2.31
NPHP3-202ENST00000383282 SPIRE1Q08AE8 756 aa29.45■■■□□ 2.31
NPHP3-202ENST00000383282 NR5A1Q13285 461 aa29.45■■■□□ 2.31
NPHP3-202ENST00000383282 PCBP1Q15365 356 aaKnown RBP eCLIP29.45■■■□□ 2.31
NPHP3-202ENST00000383282 RARS2Q5T160 578 aaKnown RBP29.45■■■□□ 2.31
NPHP3-202ENST00000383282 PPFIBP1Q86W92 1011 aa29.45■■■□□ 2.31
NPHP3-202ENST00000383282 CNNM3Q8NE01 707 aa29.45■■■□□ 2.31
NPHP3-202ENST00000383282 POMKQ9H5K3 350 aa29.45■■■□□ 2.31
NPHP3-202ENST00000383282 TRIOO75962 3097 aa29.45■■■□□ 2.3
NPHP3-202ENST00000383282 HOXA11P31270 313 aaPredicted RBP29.44■■■□□ 2.3
NPHP3-202ENST00000383282 MRE11P49959 708 aa29.44■■■□□ 2.3
NPHP3-202ENST00000383282 NCBP1Q09161 790 aaKnown RBP29.44■■■□□ 2.3
NPHP3-202ENST00000383282 MXD4Q14582 209 aaPredicted RBP29.44■■■□□ 2.3
NPHP3-202ENST00000383282 ZNF280BQ86YH2 543 aa29.44■■■□□ 2.3
NPHP3-202ENST00000383282 BCL7CQ8WUZ0 217 aaPredicted RBP29.44■■■□□ 2.3
NPHP3-202ENST00000383282 CCDC43Q96MW1 224 aaKnown RBP29.44■■■□□ 2.3
NPHP3-202ENST00000383282 TMEM175Q9BSA9 504 aa29.44■■■□□ 2.3
NPHP3-202ENST00000383282 UBN1Q9NPG3 1134 aa29.44■■■□□ 2.3
NPHP3-202ENST00000383282 CDH22Q9UJ99 828 aa29.44■■■□□ 2.3
NPHP3-202ENST00000383282 PCDHA12Q9UN75 941 aa29.44■■■□□ 2.3
NPHP3-202ENST00000383282 ZNF318Q5VUA4 2279 aa29.44■■■□□ 2.3
NPHP3-202ENST00000383282 FAM205CA6NFA0 338 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 ALDH2P05091 517 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 NCLP19338 710 aaKnown RBP29.43■■■□□ 2.3
NPHP3-202ENST00000383282 AXLP30530 894 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 TFDP1Q14186 410 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 CALCRLQ16602 461 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 ATAT1Q5SQI0 421 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 EMILIN2Q9BXX0 1053 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 FAN1Q9Y2M0 1017 aa29.43■■■□□ 2.3
NPHP3-202ENST00000383282 PIEZO1Q92508 2521 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 SPDYE4A6NLX3 237 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 SLITRK3O94933 977 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 FDPSP14324 419 aaKnown RBP29.42■■■□□ 2.3
NPHP3-202ENST00000383282 EPCAMP16422 314 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 PTPN5P54829 565 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 PTPN14Q15678 1187 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 UBXN11Q5T124 520 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 KIAA1841Q6NSI8 718 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 CABP7Q86V35 215 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 NECAB1Q8N987 351 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 TNFRSF25Q93038 417 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 GTF3C6Q969F1 213 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 ASIC4Q96FT7 647 aa29.42■■■□□ 2.3
NPHP3-202ENST00000383282 EIF2AK1Q9BQI3 630 aaKnown RBP29.42■■■□□ 2.3
NPHP3-202ENST00000383282 C2CD4DB7Z1M9 353 aa29.41■■■□□ 2.3
NPHP3-202ENST00000383282 ZBTB39O15060 712 aa29.41■■■□□ 2.3
NPHP3-202ENST00000383282 DDHD2O94830 711 aa29.41■■■□□ 2.3
NPHP3-202ENST00000383282 ITGA4P13612 1032 aa29.41■■■□□ 2.3
NPHP3-202ENST00000383282 TRIM29Q14134 588 aa29.41■■■□□ 2.3
NPHP3-202ENST00000383282 C12orf76Q8N812 135 aaPredicted RBP29.41■■■□□ 2.3
NPHP3-202ENST00000383282 CCDC51Q96ER9 411 aa29.41■■■□□ 2.3
NPHP3-202ENST00000383282 DBR1Q9UK59 544 aaKnown RBP29.41■■■□□ 2.3
NPHP3-202ENST00000383282 DGAT1O75907 488 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 LYPLA2O95372 231 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 POMCP01189 267 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 WEE2P0C1S8 567 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 PTENP60484 403 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 MTMR3Q13615 1198 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 ME3Q16798 604 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 NOTUMQ6P988 496 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 KREMEN2Q8NCW0 462 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 SLC22A17Q8WUG5 538 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 XPNPEP1Q9NQW7 623 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 ANKEF1Q9NU02 776 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 SORCS3Q9UPU3 1222 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 GTF3C3Q9Y5Q9 886 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 WDFY4Q6ZS81 3184 aa29.4■■■□□ 2.3
NPHP3-202ENST00000383282 INO80B-WBP1J3KQ70 363 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 B4GALT3O60512 393 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 NEMFO60524 1076 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 KLRC2P26717 231 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 POU5F1BQ06416 359 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 IER5LQ5T953 404 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 UBALD2Q8IYN6 164 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 TDRD5Q8NAT2 981 aaKnown RBP29.39■■■□□ 2.3
NPHP3-202ENST00000383282 PRSS33Q8NF86 280 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 HSD17B14Q9BPX1 270 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 VN1R3Q9BXE9 311 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 TTC12Q9H892 705 aaPredicted RBP29.39■■■□□ 2.3
NPHP3-202ENST00000383282 SFXN1Q9H9B4 322 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 MRPL17Q9NRX2 175 aaKnown RBP29.39■■■□□ 2.3
NPHP3-202ENST00000383282 IPPQ9Y573 584 aa29.39■■■□□ 2.3
NPHP3-202ENST00000383282 NRP1O14786 923 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms