RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 POLD4Q9HCU8 107 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 ADARB2Q9NS39 739 aaKnown RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 ADAMTS1Q9UHI8 967 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 UBIAD1Q9Y5Z9 338 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 DDNO94850 711 aaPredicted RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 DSG3P32926 999 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 DNA2P51530 1060 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 CTTNQ14247 550 aaKnown RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 TRADDQ15628 312 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 SLC30A10Q6XR72 485 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 TPH2Q8IWU9 490 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 RASGEF1CQ8N431 466 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 LRRC57Q8N9N7 239 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 NEK9Q8TD19 979 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 UBLCP1Q8WVY7 318 aaPredicted RBP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 CHMP6Q96FZ7 201 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 KCNH7Q9NS40 1196 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 TMOD4Q9NZQ9 345 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 TBC1D7Q9P0N9 293 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 FBXL5Q9UKA1 691 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 ADAMTS5Q9UNA0 930 aa9.67□□□□□ -0.86
GPNMB-202ENST00000381990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.67□□□□□ -0.86
GPNMB-202ENST00000381990 A0A0A6YYK5 440 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 TRAF5O00463 557 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 SLC8A3P57103 927 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RAPGEF1Q13905 1077 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 ITIH4Q14624 930 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 COG2Q14746 738 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 TKFCQ3LXA3 575 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 ERMARDQ5T6L9 678 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RNF207Q6ZRF8 634 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 CROCCP2Q86T23 111 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 REPS2Q8NFH8 660 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 CCHCR1Q8TD31 782 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 SCFD1Q8WVM8 642 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 NACC1Q96RE7 527 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 TAAR1Q96RJ0 339 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RUSC1Q9BVN2 902 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 FGFBP2Q9BYJ0 223 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 ZHX3Q9H4I2 956 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RNF146Q9NTX7 359 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 HAUS2Q9NVX0 235 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RNF181Q9P0P0 153 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 INTUQ9ULD6 942 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 TTC7AQ9ULT0 858 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 TPX2Q9ULW0 747 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 PACSIN2Q9UNF0 486 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 UTP11Q9Y3A2 253 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 COL11A1P12107 1806 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 LOXHD1Q8IVV2 1947 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 KRIT1O00522 736 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 ASAP2O43150 1006 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 CEP104O60308 925 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 USP2O75604 605 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 NPEPPSP55786 919 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 MAGOHP61326 146 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 MRPS9P82933 396 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RIPK1Q13546 671 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 BYSLQ13895 437 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 SLMAPQ14BN4 828 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 CLUL1Q15846 466 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 QPCTQ16769 361 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 SFR1Q86XK3 245 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 CCDC197Q8NCU1 140 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 PIGOQ8TEQ8 1089 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 MAGOHBQ96A72 148 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 TLCD1Q96CP7 247 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 HVCN1Q96D96 273 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 WNK4Q96J92 1243 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RMDN3Q96TC7 470 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 RAB17Q9H0T7 212 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 BCCIPQ9P287 314 aaKnown RBP eCLIP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 SUCLA2Q9P2R7 463 aaPredicted RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 NOC2LQ9Y3T9 749 aaKnown RBP9.66□□□□□ -0.86
GPNMB-202ENST00000381990 AFG3L2Q9Y4W6 797 aa9.66□□□□□ -0.86
GPNMB-202ENST00000381990 ATP2A1O14983 1001 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 TBCAO75347 108 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 GAP43P17677 238 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 DRD4P21917 467 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 TMOD1P28289 359 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 PGM5Q15124 567 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 KRT71Q3SY84 523 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 RINT1Q6NUQ1 792 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 XRRA1Q6P2D8 792 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 NSMFQ6X4W1 530 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 CATSPERGQ6ZRH7 1159 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 SLFN11Q7Z7L1 901 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 VPS36Q86VN1 386 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 FAM228AQ86W67 206 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 ZC3H3Q8IXZ2 948 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 FAM133AQ8N9E0 248 aa9.65□□□□□ -0.86
GPNMB-202ENST00000381990 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
GPNMB-202ENST00000381990 DCPSQ96C86 337 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms