RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MIS18BP1Q6P0N0 1132 aa14.91□□□□□ -0.02
SDC1-202ENST00000381150 TRMT1LQ7Z2T5 733 aaKnown RBP14.91□□□□□ -0.02
SDC1-202ENST00000381150 C7orf43Q8WVR3 580 aa14.91□□□□□ -0.02
SDC1-202ENST00000381150 GSTTP1A0A1W2PQM5 241 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 G3V3G9 751 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 MEIS2O14770 477 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 ECE2O60344 883 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 GNAT1P11488 350 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 CCND1P24385 295 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 CCDC6Q16204 474 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 DCAF8Q5TAQ9 597 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 TAOK1Q7L7X3 1001 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 CCHCR1Q8TD31 782 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 DCAF4Q8WV16 495 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 SPIRE2Q8WWL2 714 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 ERP44Q9BS26 406 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 KLHL14Q9P2G3 628 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 SLC12A4Q9UP95 1085 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 CYP3A7-CYP3A51PA0A087WV96 503 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 SFI1A8K8P3 1242 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 XRCC5P13010 732 aaKnown RBP14.9□□□□□ -0.02
SDC1-202ENST00000381150 CYP3A7P24462 503 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 SLC35G2Q8TBE7 412 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 NAF1Q96HR8 494 aaKnown RBP14.9□□□□□ -0.02
SDC1-202ENST00000381150 KCNMB3Q9NPA1 279 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 HOMER3Q9NSC5 361 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 RASAL2Q9UJF2 1139 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 ZMYND8Q9ULU4 1186 aaPredicted RBP14.9□□□□□ -0.02
SDC1-202ENST00000381150 G3BP2Q9UN86 482 aaKnown RBP14.9□□□□□ -0.02
SDC1-202ENST00000381150 LRRD1A4D1F6 860 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 SNX3O60493 162 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 NEFHP12036 1026 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 TARSP26639 723 aaKnown RBP14.9□□□□□ -0.02
SDC1-202ENST00000381150 GRIK3Q13003 919 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 SEPT2Q15019 361 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 KIAA1755Q5JYT7 1200 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 STYK1Q6J9G0 422 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 SLC30A9Q6PML9 568 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
SDC1-202ENST00000381150 SLITRK6Q9H5Y7 841 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 GCNT4Q9P109 453 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 CTTNBP2NLQ9P2B4 639 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 TMEM59LQ9UK28 342 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 PCDHA12Q9UN75 941 aa14.9□□□□□ -0.02
SDC1-202ENST00000381150 PCNTO95613 3336 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 KIF3CO14782 793 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 PSMD2Q13200 908 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 SLFN13Q68D06 897 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 CCDC65Q8IXS2 484 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 SERPINA10Q9UK55 444 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 PCDHA1Q9Y5I3 950 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 A0A1W2PRG0 241 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 POTEB3A0JP26 581 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 POTECB2RU33 542 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 PLS1Q14651 629 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 MESDQ14696 234 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 C6orf118Q5T5N4 469 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 FOXR2Q6PJQ5 311 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 POTEBQ6S5H4 581 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 SRRM1Q8IYB3 904 aaKnown RBP14.89□□□□□ -0.03
SDC1-202ENST00000381150 FITM2Q8N6M3 262 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 MAB21L3Q8N8X9 362 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 POP1Q99575 1024 aaKnown RBP14.89□□□□□ -0.03
SDC1-202ENST00000381150 TRIM7Q9C029 511 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 IKZF4Q9H2S9 585 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 ZFATQ9P243 1243 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 INTUQ9ULD6 942 aa14.89□□□□□ -0.03
SDC1-202ENST00000381150 DPPA5A6NC42 116 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 ASAP2O43150 1006 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 SMNDC1O75940 238 aaKnown RBP eCLIP14.88□□□□□ -0.03
SDC1-202ENST00000381150 ITIH4Q14624 930 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 RRP1BQ14684 758 aaKnown RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 MUM1Q2TAK8 710 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 ZNF746Q6NUN9 644 aaPredicted RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 SPATA21Q7Z572 469 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 SYCE1Q8N0S2 351 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 RMDN2Q96LZ7 410 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 TGS1Q96RS0 853 aaKnown RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 ASIC3Q9UHC3 531 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 PCDHA2Q9Y5H9 948 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 RBAK-RBAKDNI3L0D1 243 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 PAEPP09466 180 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 STAT3P40763 770 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 PABPC4Q13310 644 aaKnown RBP eCLIP14.88□□□□□ -0.03
SDC1-202ENST00000381150 ZCWPW2Q504Y3 356 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 CRELD2Q6UXH1 353 aaPredicted RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 RFX8Q6ZV50 586 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 LMNTD2Q8IXW0 634 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 C1orf131Q8NDD1 294 aaKnown RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 L3MBTL3Q96JM7 780 aaPredicted RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 PIDD1Q9HB75 910 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 ADAM22Q9P0K1 906 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 HAO1Q9UJM8 370 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 ATRNL1Q5VV63 1379 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 SRRM3A6NNA2 597 aaPredicted RBP14.88□□□□□ -0.03
SDC1-202ENST00000381150 F5H6K3 240 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 MYBP10242 640 aa14.88□□□□□ -0.03
SDC1-202ENST00000381150 KLRC3Q07444 240 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms