RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 USP25Q9UHP3 1055 aa22.02■■□□□ 1.11
CDPF1-202ENST00000381037 CHD7Q9P2D1 2997 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 K7ERI5 159 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 SMTNP53814 917 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 ZNF598Q86UK7 904 aaKnown RBP22.01■■□□□ 1.11
CDPF1-202ENST00000381037 MYCT1Q8N699 235 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 ENGASEQ8NFI3 743 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 LRCH3Q96II8 777 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 LRRC27Q9C0I9 530 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 CDH23Q9H251 3354 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 ELAC1Q9H777 363 aaKnown RBP22.01■■□□□ 1.11
CDPF1-202ENST00000381037 CNTNAP2Q9UHC6 1331 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 YBX2Q9Y2T7 364 aaKnown RBP22.01■■□□□ 1.11
CDPF1-202ENST00000381037 PCDHA11Q9Y5I1 949 aa22.01■■□□□ 1.11
CDPF1-202ENST00000381037 TRAK2O60296 914 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 ZNF623O75123 536 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 TBCAO75347 108 aaKnown RBP22■■□□□ 1.11
CDPF1-202ENST00000381037 UPP2O95045 317 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 PRKCBP05771 671 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 MAPTP10636 758 aaKnown RBP22■■□□□ 1.11
CDPF1-202ENST00000381037 ATF7P17544 494 aaPredicted RBP22■■□□□ 1.11
CDPF1-202ENST00000381037 FXR1P51114 621 aaKnown RBP eCLIP22■■□□□ 1.11
CDPF1-202ENST00000381037 AMPD3Q01432 767 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 SNW1Q13573 536 aaKnown RBP22■■□□□ 1.11
CDPF1-202ENST00000381037 ECHDC2Q86YB7 292 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 NPAS4Q8IUM7 802 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 CPB2Q96IY4 423 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 RAD9AQ99638 391 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 USP20Q9Y2K6 914 aa22■■□□□ 1.11
CDPF1-202ENST00000381037 PHLPP2Q6ZVD8 1323 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 GADD45BO75293 160 aaPredicted RBP21.99■■□□□ 1.11
CDPF1-202ENST00000381037 MYOGP15173 224 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 CSPP1Q1MSJ5 1256 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 TPRNQ4KMQ1 711 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 NT5DC1Q5TFE4 455 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 TWF2Q6IBS0 349 aaKnown RBP21.99■■□□□ 1.11
CDPF1-202ENST00000381037 FAM117BQ6P1L5 589 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 NOTUMQ6P988 496 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 HAUS6Q7Z4H7 955 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 FMR1NBQ8N0W7 255 aaPredicted RBP21.99■■□□□ 1.11
CDPF1-202ENST00000381037 ZNF689Q96CS4 500 aaPredicted RBP21.99■■□□□ 1.11
CDPF1-202ENST00000381037 CCDC51Q96ER9 411 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 PAGE5Q96GU1 130 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 ST6GALNAC4Q9H4F1 302 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 TMEM161AQ9NX61 479 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 COL4A6Q14031 1691 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 MYH11P35749 1972 aa21.99■■□□□ 1.11
CDPF1-202ENST00000381037 GOLGA6L4A6NEF3 574 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 TLL1O43897 1013 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 DGKIO75912 1065 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 ZNF202O95125 648 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 DNAJB2P25686 324 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 CASP1P29466 404 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 NCBP1Q09161 790 aaKnown RBP21.98■■□□□ 1.11
CDPF1-202ENST00000381037 GRAMD1CQ8IYS0 662 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 CEP57L1Q8IYX8 460 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 SP7Q8TDD2 431 aaPredicted RBP21.98■■□□□ 1.11
CDPF1-202ENST00000381037 STRA6Q9BX79 667 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 ZHX3Q9H4I2 956 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 OLFML3Q9NRN5 406 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 FAM105AQ9NUU6 356 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 SEL1LQ9UBV2 794 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 INSL6Q9Y581 213 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 LCHNA4D1U4 455 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 GAP43P17677 238 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 SCP2P22307 547 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 AFMP43652 599 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 PRPF4BQ13523 1007 aaKnown RBP21.98■■□□□ 1.11
CDPF1-202ENST00000381037 CUL4BQ13620 913 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 RAB30Q15771 203 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 KRBA2Q6ZNG9 492 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 MRPL10Q7Z7H8 261 aaKnown RBP21.98■■□□□ 1.11
CDPF1-202ENST00000381037 SFR1Q86XK3 245 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 FAM178BQ8IXR5 827 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 ZBED2Q9BTP6 218 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 RNF19AQ9NV58 838 aa21.98■■□□□ 1.11
CDPF1-202ENST00000381037 EOMESO95936 686 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 STAG3L1P0CL83 205 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 NMT1P30419 496 aaKnown RBP21.97■■□□□ 1.11
CDPF1-202ENST00000381037 GTF2BQ00403 316 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 ZNF720Q7Z2F6 126 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 CDR2LQ86X02 465 aaPredicted RBP21.97■■□□□ 1.11
CDPF1-202ENST00000381037 EIF2AQ9BY44 585 aaKnown RBP21.97■■□□□ 1.11
CDPF1-202ENST00000381037 BLZF1Q9H2G9 400 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 PDZD7Q9H5P4 517 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 PTPRHQ9HD43 1115 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 PANK4Q9NVE7 773 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 PCDHB7Q9Y5E2 793 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 PCDHB2Q9Y5E7 798 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 GBF1Q92538 1859 aa21.97■■□□□ 1.11
CDPF1-202ENST00000381037 H0YCG3 227 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 PPP1R37O75864 691 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 ARHGEF15O94989 841 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 IDEP14735 1019 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 RAB27AP51159 221 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 FAM160A1Q05DH4 1040 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 EHHADHQ08426 723 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 GPR153Q6NV75 609 aa21.96■■□□□ 1.11
CDPF1-202ENST00000381037 SMG8Q8ND04 991 aaKnown RBP21.96■■□□□ 1.11
CDPF1-202ENST00000381037 ACO2Q99798 780 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms