RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PADI6Q6TGC4 694 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF365Q70YC5 407 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 TAX1BP1Q86VP1 789 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 NOSTRINQ8IVI9 506 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 SMYD4Q8IYR2 804 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 SPDYE1Q8NFV5 336 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CCDC26Q8TAB7 109 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 TTC8Q8TAM2 541 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 GABRQQ9UN88 632 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 RWDD3Q9Y3V2 267 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 NEDD4P46934 1319 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 MOXD2PA6NHM9 499 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 H0YGN5 161 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 H3BQ06 376 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CFIP05156 583 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 IVLP07476 585 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 INSRRP14616 1297 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 GRIK4Q16099 956 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 DENND2CQ68D51 928 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 RWDD4Q6NW29 188 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 GSTA5Q7RTV2 222 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 DAAM2Q86T65 1068 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 DDX12PQ92771 950 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 ARHGAP9Q9BRR9 750 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 MMTAG2Q9BU76 263 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 ARHGAP39Q9C0H5 1083 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 ADAM21Q9UKJ8 722 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 TBC1D3BA6NDS4 549 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SETD1AO15047 1707 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 PLEKHA8P1O95397 391 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SHC4Q6S5L8 630 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 TMC5Q6UXY8 1006 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 LRRC8DQ7L1W4 858 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 EMSYQ7Z589 1322 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CCDC91Q7Z6B0 441 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 XRN1Q8IZH2 1706 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 DYDC2Q96IM9 177 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 ACCSQ96QU6 501 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 TRPV6Q9H1D0 765 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 BLZF1Q9H2G9 400 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 NKX2-4Q9H2Z4 354 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 FAM204AQ9H8W3 233 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 LTBP3Q9NS15 1303 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 TXNDC16Q9P2K2 825 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 HPCAL4Q9UM19 191 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 PCDHA4Q9UN74 947 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CASTOR2A6NHX0 329 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SLC16A4O15374 487 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 STK10O94804 968 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 MBL2P11226 248 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 TNFAIP3P21580 790 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CASP7P55210 303 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SURF1Q15526 300 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CRY2Q49AN0 593 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CNPY4Q8N129 248 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 HDDC3Q8N4P3 179 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CORO1BQ9BR76 489 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 TSEN34Q9BSV6 310 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 CRACR2AQ9BSW2 395 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 VPS16Q9H269 839 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SLC38A10Q9HBR0 1119 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 A1CFQ9NQ94 594 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 FBXO10Q9UK96 956 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 PPP2R2CQ9Y2T4 447 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 NWD1Q149M9 1564 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 MEI4A8MW99 385 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 DUSP11O75319 330 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 GLUD1P00367 558 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SPATA31D3P0C874 917 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 RASA1P20936 1047 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 GUCY1A2P33402 732 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 DAB2P98082 770 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 PRKCEQ02156 737 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 MXD4Q14582 209 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 LRRC31Q6UY01 552 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SPATA31D4Q6ZUB0 917 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 IGSF22Q8N9C0 903 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 POP1Q99575 1024 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 SAMSN1Q9NSI8 373 aaKnown RBP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 PANK4Q9NVE7 773 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 WBP1LQ9NX94 342 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 HDAC6Q9UBN7 1215 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 TJP2Q9UDY2 1190 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 INSL6Q9Y581 213 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
NEDD9-202ENST00000379446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.04□□□□□ -1.28
NEDD9-202ENST00000379446 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 IGF2BP3O00425 579 aaKnown RBP eCLIP7.03□□□□□ -1.289e-6■■■□□ 18
NEDD9-202ENST00000379446 SLURP2P0DP57 97 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 ADORA2BP29275 332 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 CCND3P30281 292 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF280DQ6N043 979 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 C16orf86Q6ZW13 317 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 TADA2BQ86TJ2 420 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 RIOX2Q8IUF8 465 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 GOLGA5Q8TBA6 731 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 LXNQ9BS40 222 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 MIS12Q9H081 205 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms