RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SMAD3P84022 425 aaKnown RBP20.65■□□□□ 0.9
SSU72-203ENST00000378725 KRBA2Q6ZNG9 492 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 TAS1R3Q7RTX0 852 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 MYOCDQ8IZQ8 938 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 ZHX3Q9H4I2 956 aa20.65■□□□□ 0.9
SSU72-203ENST00000378725 ELAC1Q9H777 363 aaKnown RBP20.65■□□□□ 0.9
SSU72-203ENST00000378725 GRXCR1A8MXD5 290 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 B4GALT5O43286 388 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 GJB5O95377 273 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 PRKCBP05771 671 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 MYL1P05976 194 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 AFMP43652 599 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 FAM160A1Q05DH4 1040 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 UBXN11Q5T124 520 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 HAUS6Q7Z4H7 955 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 TMCO2Q7Z6W1 182 aaPredicted RBP20.64■□□□□ 0.89
SSU72-203ENST00000378725 CCDC65Q8IXS2 484 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 SLC17A8Q8NDX2 589 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 CCDC51Q96ER9 411 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 ST6GALNAC4Q9H4F1 302 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 PANK4Q9NVE7 773 aa20.64■□□□□ 0.89
SSU72-203ENST00000378725 RNF216Q9NWF9 866 aaPredicted RBP20.64■□□□□ 0.89
SSU72-203ENST00000378725 CNTNAP2Q9UHC6 1331 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 PVALEFA0A1B0GWK0 134 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 TTLL13PA6NNM8 815 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 ZNF623O75123 536 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 EDN1P05305 212 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 IDEP14735 1019 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 UBE2HP62256 183 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 PRPF4BQ13523 1007 aaKnown RBP20.63■□□□□ 0.89
SSU72-203ENST00000378725 CUL4BQ13620 913 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 HERC4Q5GLZ8 1057 aaPredicted RBP20.63■□□□□ 0.89
SSU72-203ENST00000378725 NT5DC1Q5TFE4 455 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 TWF2Q6IBS0 349 aaKnown RBP20.63■□□□□ 0.89
SSU72-203ENST00000378725 NOTUMQ6P988 496 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 ZNF720Q7Z2F6 126 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 SFR1Q86XK3 245 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 ECHDC2Q86YB7 292 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 NPAS4Q8IUM7 802 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 FAM178BQ8IXR5 827 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 GRAMD1CQ8IYS0 662 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 CNNM3Q8NE01 707 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 CPB2Q96IY4 423 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 OLFML3Q9NRN5 406 aa20.63■□□□□ 0.89
SSU72-203ENST00000378725 PRPF40AO75400 957 aaKnown RBP20.62■□□□□ 0.89
SSU72-203ENST00000378725 EOMESO95936 686 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 STAG3L1P0CL83 205 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 SKIP12755 728 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 CASP1P29466 404 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 ABCD1P33897 745 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 ASIC1P78348 528 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 HTRA4P83105 476 aaPredicted RBP20.62■□□□□ 0.89
SSU72-203ENST00000378725 GTF2BQ00403 316 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 KANK3Q6NY19 840 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 UNC13DQ70J99 1090 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 ZNF598Q86UK7 904 aaKnown RBP20.62■□□□□ 0.89
SSU72-203ENST00000378725 TIGD1Q96MW7 591 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 STRA6Q9BX79 667 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 BLZF1Q9H2G9 400 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 FAM105AQ9NUU6 356 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 TMEM161AQ9NX61 479 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 PCDHB7Q9Y5E2 793 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 PCDHA11Q9Y5I1 949 aa20.62■□□□□ 0.89
SSU72-203ENST00000378725 MICAL3Q7RTP6 2002 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 GTPBP6O43824 516 aaPredicted RBP20.61■□□□□ 0.89
SSU72-203ENST00000378725 UPP2O95045 317 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 LIG1P18858 919 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 NMT1P30419 496 aaKnown RBP20.61■□□□□ 0.89
SSU72-203ENST00000378725 RAB27AP51159 221 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 RABGGTBP53611 331 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 EHHADHQ08426 723 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 COASYQ13057 564 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 MRPL10Q7Z7H8 261 aaKnown RBP20.61■□□□□ 0.89
SSU72-203ENST00000378725 ZNF689Q96CS4 500 aaPredicted RBP20.61■□□□□ 0.89
SSU72-203ENST00000378725 GBP4Q96PP9 640 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 RAD9AQ99638 391 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 ACO2Q99798 780 aaKnown RBP20.61■□□□□ 0.89
SSU72-203ENST00000378725 MRPL4Q9BYD3 311 aaKnown RBP20.61■□□□□ 0.89
SSU72-203ENST00000378725 PBX4Q9BYU1 374 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 TBX20Q9UMR3 447 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 USP20Q9Y2K6 914 aa20.61■□□□□ 0.89
SSU72-203ENST00000378725 K7ENM7 598 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 SOX1O00570 391 aaPredicted RBP20.6■□□□□ 0.89
SSU72-203ENST00000378725 N4BP3O15049 544 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 KLRC4O43908 158 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 NR1I2O75469 434 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 PPP1R37O75864 691 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 DGKIO75912 1065 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 ATF7P17544 494 aaPredicted RBP20.6■□□□□ 0.89
SSU72-203ENST00000378725 STRN3Q13033 797 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 RAB30Q15771 203 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 FAM117BQ6P1L5 589 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 SLC27A1Q6PCB7 646 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 ELOA2Q8IYF1 753 aaPredicted RBP20.6■□□□□ 0.89
SSU72-203ENST00000378725 ZBED2Q9BTP6 218 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 EIF2AQ9BY44 585 aaKnown RBP20.6■□□□□ 0.89
SSU72-203ENST00000378725 PDZD7Q9H5P4 517 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 MRPL44Q9H9J2 332 aaKnown RBP20.6■□□□□ 0.89
SSU72-203ENST00000378725 PTPRHQ9HD43 1115 aa20.6■□□□□ 0.89
SSU72-203ENST00000378725 LRFN2Q9ULH4 789 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms