RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PRKCBP05771 671 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 MAPTP10636 758 aaKnown RBP14.59□□□□□ -0.07
CKAP2-202ENST00000378034 NDUFA8P51970 172 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 NCKAP1LP55160 1127 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 HTRA4P83105 476 aaPredicted RBP14.59□□□□□ -0.07
CKAP2-202ENST00000378034 TWF2Q6IBS0 349 aaKnown RBP14.59□□□□□ -0.07
CKAP2-202ENST00000378034 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 C7orf25Q9BPX7 421 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 PBX4Q9BYU1 374 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 TMEM161AQ9NX61 479 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 LRFN2Q9ULH4 789 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 PCDHB7Q9Y5E2 793 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 CNTNAP2Q9UHC6 1331 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 TMEM265A0A087WTH1 108 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 FRMD3A2A2Y4 597 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 SLC16A4O15374 487 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 ACTN4O43707 911 aaKnown RBP14.58□□□□□ -0.07
CKAP2-202ENST00000378034 TLL1O43897 1013 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 TRAK2O60296 914 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 ZNF623O75123 536 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 MYL1P05976 194 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 ARF4P18085 180 aaPredicted RBP14.58□□□□□ -0.07
CKAP2-202ENST00000378034 PRPF4BQ13523 1007 aaKnown RBP14.58□□□□□ -0.07
CKAP2-202ENST00000378034 CLEC17AQ6ZS10 378 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 TMEM161BQ8NDZ6 487 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 CNNM3Q8NE01 707 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 RSPH1Q8WYR4 309 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 KIFC3Q9BVG8 833 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 TRIM9Q9C026 710 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 SERTAD1Q9UHV2 236 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 GBF1Q92538 1859 aa14.58□□□□□ -0.07
CKAP2-202ENST00000378034 COL4A6Q14031 1691 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 A0A1B0GUA9 196 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 HOXA2O43364 376 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 UPP2O95045 317 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 ECHDC2Q86YB7 292 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 FAM178BQ8IXR5 827 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 CCDC65Q8IXS2 484 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 CCDC34Q96HJ3 373 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 ST6GALNAC4Q9H4F1 302 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 ZHX3Q9H4I2 956 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 FAM105AQ9NUU6 356 aa14.58□□□□□ -0.08
CKAP2-202ENST00000378034 RBAK-RBAKDNI3L0D1 243 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 SOX1O00570 391 aaPredicted RBP14.57□□□□□ -0.08
CKAP2-202ENST00000378034 N4BP3O15049 544 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 DGKIO75912 1065 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 DNAJB2P25686 324 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 RABGGTBP53611 331 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 STRN3Q13033 797 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 LONRF3Q496Y0 759 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 SLC27A1Q6PCB7 646 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 HAUS6Q7Z4H7 955 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 APBB1IPQ7Z5R6 666 aaPredicted RBP14.57□□□□□ -0.08
CKAP2-202ENST00000378034 PGBD4Q96DM1 585 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 MRPL4Q9BYD3 311 aaKnown RBP14.57□□□□□ -0.08
CKAP2-202ENST00000378034 GOLPH3LQ9H4A5 285 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 OLFML3Q9NRN5 406 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 PANK4Q9NVE7 773 aa14.57□□□□□ -0.08
CKAP2-202ENST00000378034 B4GALT5O43286 388 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 ZNF202O95125 648 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 IDEP14735 1019 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 UBXN11Q5T124 520 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 KANK3Q6NY19 840 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 TMCO2Q7Z6W1 182 aaPredicted RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 ZNF598Q86UK7 904 aaKnown RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 STAMQ92783 540 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 TIFAQ96CG3 184 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 ZNF689Q96CS4 500 aaPredicted RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 CPB2Q96IY4 423 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 YME1L1Q96TA2 773 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 PCDHB2Q9Y5E7 798 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 PVALEFA0A1B0GWK0 134 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 K7ENM7 598 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 LIG1P18858 919 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 PBX2P40425 430 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 FXR1P51114 621 aaKnown RBP eCLIP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 ASIC1P78348 528 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 GTF2BQ00403 316 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 TMEM132AQ24JP5 1023 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 HERC4Q5GLZ8 1057 aaPredicted RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 KRBA2Q6ZNG9 492 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 TAS1R3Q7RTX0 852 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 MRPL10Q7Z7H8 261 aaKnown RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 SFR1Q86XK3 245 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 HVCN1Q96D96 273 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 FIZ1Q96SL8 496 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 ADPGKQ9BRR6 497 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 RC3H2Q9HBD1 1191 aaKnown RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 TNFSF13BQ9Y275 285 aa14.56□□□□□ -0.08
CKAP2-202ENST00000378034 YBX2Q9Y2T7 364 aaKnown RBP14.56□□□□□ -0.08
CKAP2-202ENST00000378034 AFMP43652 599 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 FAM160A1Q05DH4 1040 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 ALCAMQ13740 583 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 ATF7IP2Q5U623 682 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 ZPBP2Q6X784 338 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 UNC13DQ70J99 1090 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms