RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 NEDD1Q8NHV4 660 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 ATP8A1Q9Y2Q0 1164 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 PPP2R3BQ9Y5P8 575 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 PQBP1O60828 265 aaKnown RBP11.55□□□□□ -0.56
HIF3A-205ENST00000377670 APOEP02649 317 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 SFSWAPQ12872 951 aaKnown RBP11.55□□□□□ -0.56
HIF3A-205ENST00000377670 TTC23LQ6PF05 361 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 USP50Q70EL3 339 aaPredicted RBP11.55□□□□□ -0.56
HIF3A-205ENST00000377670 ALKBH8Q96BT7 664 aaKnown RBP11.55□□□□□ -0.56
HIF3A-205ENST00000377670 OPTNQ96CV9 577 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 SRPK1Q96SB4 655 aaKnown RBP11.55□□□□□ -0.56
HIF3A-205ENST00000377670 MRPL4Q9BYD3 311 aaKnown RBP11.55□□□□□ -0.56
HIF3A-205ENST00000377670 C17orf102A2RUQ5 167 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 ITGA4P13612 1032 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 SOX5P35711 763 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 MMP14P50281 582 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 HHIPL2Q6UWX4 724 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 DEFB128Q7Z7B8 93 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 SCFD2Q8WU76 684 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 ASIC4Q96FT7 647 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 SH3BP1Q9Y3L3 701 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
HIF3A-205ENST00000377670 GRIK1P39086 918 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 FAM133AQ8N9E0 248 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 HVCN1Q96D96 273 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 SPDL1Q96EA4 605 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 GLIS2Q9BZE0 524 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-205ENST00000377670 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 HOXA2O43364 376 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 ORC4O43929 436 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 PRPSAP2O60256 369 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 MGEA5O60502 916 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 CYP2C9P11712 490 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 PRCPP42785 496 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 ALDH1A3P47895 512 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 SLC7A5Q01650 507 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 KRT31Q15323 416 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 DCAF4L1Q3SXM0 396 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 DNAJC24Q6P3W2 148 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 STK17AQ9UEE5 414 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 PCDHB12Q9Y5F1 795 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 MYOM1P52179 1685 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 COL5A2P05997 1499 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-205ENST00000377670 IKBKBO14920 756 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 NR1D1P20393 614 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 CA4P22748 312 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 NOGQ13253 232 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 BAATQ14032 418 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-205ENST00000377670 RAB44Q7Z6P3 723 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-205ENST00000377670 DNAAF3Q8N9W5 541 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 MRPL46Q9H2W6 279 aaKnown RBP11.54□□□□□ -0.56
HIF3A-205ENST00000377670 JPH1Q9HDC5 661 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-205ENST00000377670 MTMR4Q9NYA4 1195 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 THEGQ9P2T0 379 aa11.54□□□□□ -0.56
HIF3A-205ENST00000377670 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 SART1O43290 800 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 RASA1P20936 1047 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 GRIN1Q05586 938 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 CCDC15Q0P6D6 951 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 SNX17Q15036 470 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 CYP4A22Q5TCH4 519 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 GPC2Q8N158 579 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 POLR3FQ9H1D9 316 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 OLA1Q9NTK5 396 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 MAD1L1Q9Y6D9 718 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 STK36Q9NRP7 1315 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 MYO1FO00160 1098 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 STXBP3O00186 592 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 H2AFZP0C0S5 128 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 GARSP41250 739 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 H2AFVQ71UI9 128 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 PDCD7Q8N8D1 485 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 ZKSCAN4Q969J2 545 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 GAS2L1Q99501 681 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 MRPS25P82663 173 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 FKBP3Q00688 224 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 NFIAQ12857 509 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 THOC5Q13769 683 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 TMEM132BQ14DG7 1078 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 CYFIP1Q7L576 1253 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 ENOX1Q8TC92 643 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 HDAC11Q96DB2 347 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 DHTKD1Q96HY7 919 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 NOVA2Q9UNW9 492 aaKnown RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 C2CD2LO14523 706 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 SLCO1A2P46721 670 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 MXI1P50539 228 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 DGKZQ13574 1117 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 ZNF699Q32M78 642 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 NEK9Q8TD19 979 aa11.53□□□□□ -0.56
HIF3A-205ENST00000377670 SEPT5Q99719 369 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-205ENST00000377670 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms