RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 RSAD1Q9HA92 442 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 MEIS3P2A8K0S8 358 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 PTPN5P54829 565 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 CYP4A11Q02928 519 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 PCBP1Q15365 356 aaKnown RBP eCLIP20.62■□□□□ 0.89
HDAC6-202ENST00000376610 ATAT1Q5SQI0 421 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 RARS2Q5T160 578 aaKnown RBP20.62■□□□□ 0.89
HDAC6-202ENST00000376610 TPH2Q8IWU9 490 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 ZNF579Q8NAF0 562 aaKnown RBP20.62■□□□□ 0.89
HDAC6-202ENST00000376610 RNF149Q8NC42 400 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 CNNM3Q8NE01 707 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 AUTS2Q8WXX7 1259 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 DYDC2Q96IM9 177 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 MTRQ99707 1265 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 UBN1Q9NPG3 1134 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 GJB4Q9NTQ9 266 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 RGL1Q9NZL6 768 aa20.62■□□□□ 0.89
HDAC6-202ENST00000376610 WRAP73Q9P2S5 460 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-202ENST00000376610 WDFY4Q6ZS81 3184 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 SLC11A1P49279 550 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 TFDP1Q14186 410 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 CTTNQ14247 550 aaKnown RBP20.61■□□□□ 0.89
HDAC6-202ENST00000376610 MXD4Q14582 209 aaPredicted RBP20.61■□□□□ 0.89
HDAC6-202ENST00000376610 MRPL10Q7Z7H8 261 aaKnown RBP20.61■□□□□ 0.89
HDAC6-202ENST00000376610 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 CABP7Q86V35 215 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 TMEM175Q9BSA9 504 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 EMILIN2Q9BXX0 1053 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 POMKQ9H5K3 350 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 DNAJB4Q9UDY4 337 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 DBR1Q9UK59 544 aaKnown RBP20.61■□□□□ 0.89
HDAC6-202ENST00000376610 ARID2Q68CP9 1835 aa20.61■□□□□ 0.89
HDAC6-202ENST00000376610 MYO10Q9HD67 2058 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 ALDH2P05091 517 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 MTMR3Q13615 1198 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 AGMOQ6ZNB7 445 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 ZNF280BQ86YH2 543 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 TDRD5Q8NAT2 981 aaKnown RBP20.6■□□□□ 0.89
HDAC6-202ENST00000376610 KREMEN2Q8NCW0 462 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 MINDY3Q9H8M7 445 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 CDH22Q9UJ99 828 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 PCDHA12Q9UN75 941 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 SORCS3Q9UPU3 1222 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 FAN1Q9Y2M0 1017 aa20.6■□□□□ 0.89
HDAC6-202ENST00000376610 C2CD4DB7Z1M9 353 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 ITGA4P13612 1032 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 EPCAMP16422 314 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 AXLP30530 894 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 HOXA11P31270 313 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-202ENST00000376610 AK2P54819 239 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 NR5A1Q13285 461 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 TRIM29Q14134 588 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 PTPN14Q15678 1187 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 CALCRLQ16602 461 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 KIAA1841Q6NSI8 718 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 NOTUMQ6P988 496 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 UBALD2Q8IYN6 164 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 BCL7CQ8WUZ0 217 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-202ENST00000376610 CCDC51Q96ER9 411 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 ASIC4Q96FT7 647 aa20.59■□□□□ 0.89
HDAC6-202ENST00000376610 CTDNEP1O95476 244 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 POMCP01189 267 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 SSBP05455 408 aaKnown RBP eCLIP20.58■□□□□ 0.89
HDAC6-202ENST00000376610 NCLP19338 710 aaKnown RBP20.58■□□□□ 0.89
HDAC6-202ENST00000376610 KLRC2P26717 231 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 EARS2Q5JPH6 523 aaKnown RBP20.58■□□□□ 0.89
HDAC6-202ENST00000376610 HACE1Q8IYU2 909 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 PLCD3Q8N3E9 789 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 C12orf76Q8N812 135 aaPredicted RBP20.58■□□□□ 0.89
HDAC6-202ENST00000376610 PRSS33Q8NF86 280 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 EIF2AK1Q9BQI3 630 aaKnown RBP20.58■□□□□ 0.89
HDAC6-202ENST00000376610 SFXN1Q9H9B4 322 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 MRPL17Q9NRX2 175 aaKnown RBP20.58■□□□□ 0.89
HDAC6-202ENST00000376610 SSX2IPQ9Y2D8 614 aa20.58■□□□□ 0.89
HDAC6-202ENST00000376610 CACNA1HO95180 2353 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 FAM205CA6NFA0 338 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 INO80B-WBP1J3KQ70 363 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 EIF5BO60841 1220 aaKnown RBP20.57■□□□□ 0.88
HDAC6-202ENST00000376610 DTNBO60941 627 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 NR1I2O75469 434 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 DGAT1O75907 488 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 DDHD2O94830 711 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 SLITRK3O94933 977 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 WEE2P0C1S8 567 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 UBXN11Q5T124 520 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 IER5LQ5T953 404 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 ELMSAN1Q6PJG2 1045 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 KMT2EQ8IZD2 1858 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 SLC22A17Q8WUG5 538 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 GTF3C6Q969F1 213 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 TRIM6Q9C030 488 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-202ENST00000376610 ANKEF1Q9NU02 776 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 USTQ9Y2C2 406 aa20.57■□□□□ 0.88
HDAC6-202ENST00000376610 NRP1O14786 923 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 ZBTB39O15060 712 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 NEMFO60524 1076 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 LYPLA2O95372 231 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 URODP06132 367 aa20.56■□□□□ 0.88
HDAC6-202ENST00000376610 PTENP60484 403 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms