RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 INTS2Q9H0H0 1204 aaKnown RBP11.72□□□□□ -0.53
MDC1-201ENST00000376406 TTI1O43156 1089 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 COG7P83436 770 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 NR1H3Q13133 447 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 ZKSCAN8Q15776 578 aaPredicted RBP11.72□□□□□ -0.53
MDC1-201ENST00000376406 ZNF568Q3ZCX4 644 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 EIF2AK1Q9BQI3 630 aaKnown RBP11.72□□□□□ -0.53
MDC1-201ENST00000376406 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 RRN3P2A6NIE6 340 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 ASAP2O43150 1006 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 NR1I3Q14994 352 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 ATG16L1Q676U5 607 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 FAM49AQ9H0Q0 323 aaPredicted RBP11.72□□□□□ -0.53
MDC1-201ENST00000376406 CPVLQ9H3G5 476 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 ADAM21Q9UKJ8 722 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 PP2D1A8MPX8 630 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 MAPK13O15264 365 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 LRGUKQ96M69 825 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 NUP85Q9BW27 656 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 SLITRK6Q9H5Y7 841 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 VCX3AQ9NNX9 186 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 EPS15L1Q9UBC2 864 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 CNOT8Q9UFF9 292 aaKnown RBP11.72□□□□□ -0.53
MDC1-201ENST00000376406 LTN1O94822 1766 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 KPNA6O60684 536 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 OR6B2Q6IFH4 312 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 TRIM72Q6ZMU5 477 aa11.72□□□□□ -0.53
MDC1-201ENST00000376406 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 HSPH1Q92598 858 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 DRP2Q13474 957 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 GBP7Q8N8V2 638 aaPredicted RBP11.71□□□□□ -0.53
MDC1-201ENST00000376406 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
MDC1-201ENST00000376406 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 GH1P01241 217 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 CHRNA3P32297 505 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 LRRC31Q6UY01 552 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 SCARA5Q6ZMJ2 495 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 RYBPQ8N488 228 aaPredicted RBP11.71□□□□□ -0.53
MDC1-201ENST00000376406 TTC13Q8NBP0 860 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 CCNYQ8ND76 341 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 DCTN3O75935 186 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 ACSL3O95573 720 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 HSPA8P11142 646 aaKnown RBP11.71□□□□□ -0.53
MDC1-201ENST00000376406 SOX5P35711 763 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 PMS2P54278 862 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 QRICH1Q2TAL8 776 aa11.71□□□□□ -0.53
MDC1-201ENST00000376406 ZNF564Q8TBZ8 553 aaPredicted RBP11.71□□□□□ -0.53
MDC1-201ENST00000376406 TDP2O95551 362 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 MMEP08473 750 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 ADCY1Q08828 1119 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 RCN2Q14257 317 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 ZWILCHQ9H900 591 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 ADAM22Q9P0K1 906 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.54
MDC1-201ENST00000376406 PAMP19021 973 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 PDIK1LQ8N165 341 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 KLHL29Q96CT2 875 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 SLC38A7Q9NVC3 462 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 TUBE1Q9UJT0 475 aa11.71□□□□□ -0.54
MDC1-201ENST00000376406 CACNB3P54284 484 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 DRAP1Q14919 205 aaPredicted RBP11.7□□□□□ -0.54
MDC1-201ENST00000376406 GCLMP48507 274 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ARRDC4Q8NCT1 418 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 LXNQ9BS40 222 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 KNDC1Q76NI1 1749 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 FAM187AA6NFU0 413 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 OSTNP61366 133 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 SCYL3Q8IZE3 742 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ZBED1O96006 694 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 GPC3P51654 580 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 SRRM1Q8IYB3 904 aaKnown RBP11.7□□□□□ -0.54
MDC1-201ENST00000376406 DNAAF3Q8N9W5 541 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
MDC1-201ENST00000376406 KLC2Q9H0B6 622 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 RHOBTB3O94955 611 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
MDC1-201ENST00000376406 SPARCL1Q14515 664 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
MDC1-201ENST00000376406 NYAP2Q9P242 653 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ZNF70Q9UC06 446 aaPredicted RBP11.7□□□□□ -0.54
MDC1-201ENST00000376406 IP6K2Q9UHH9 426 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 CCL15-CCL14A0A0B4J2E2 113 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 PDXKO00764 312 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 EYA4O95677 639 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 SRGNP10124 158 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ARL4CP56559 192 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 FMR1Q06787 632 aaKnown RBP eCLIP11.7□□□□□ -0.548e-7■■□□□ 12.5
MDC1-201ENST00000376406 MTMR2Q13614 643 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 CCL15Q16663 113 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ANKRD20A4Q4UJ75 823 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ANKRD20A8PQ5CZ79 823 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ANKRD20A2Q5SQ80 823 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 ANKRD20A1Q5TYW2 823 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 DHX38Q92620 1227 aaKnown RBP11.7□□□□□ -0.54
MDC1-201ENST00000376406 HDAC11Q96DB2 347 aa11.7□□□□□ -0.54
MDC1-201ENST00000376406 SMYD2Q9NRG4 433 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms