RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ZYXQ15942 572 aaKnown RBP15.71■□□□□ 0.11
MSH5-201ENST00000375703 C6orf89Q6UWU4 347 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 MIER3Q7Z3K6 550 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 JAMLQ86YT9 394 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 SUGP1Q8IWZ8 645 aaKnown RBP15.71■□□□□ 0.11
MSH5-201ENST00000375703 RIT2Q99578 217 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 PKD2L1Q9P0L9 805 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 RASAL2Q9UJF2 1139 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 HMGB2P26583 209 aaKnown RBP15.7■□□□□ 0.1
MSH5-201ENST00000375703 PMS2P54278 862 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 DRG2P55039 364 aaKnown RBP15.7■□□□□ 0.1
MSH5-201ENST00000375703 CNPY4Q8N129 248 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 DDX20Q9UHI6 824 aaKnown RBP15.7■□□□□ 0.1
MSH5-201ENST00000375703 H0YIN7 160 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 RTN2O75298 545 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 GTF2A1P52655 376 aaPredicted RBP15.7■□□□□ 0.1
MSH5-201ENST00000375703 C11orf63Q6NUN7 778 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 LDHDQ86WU2 507 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 PRPF38AQ8NAV1 312 aaKnown RBP15.7■□□□□ 0.1
MSH5-201ENST00000375703 KRT35Q92764 455 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 C18orf8Q96DM3 657 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 ACCSQ96QU6 501 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 PFASO15067 1338 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 SYNGAP1Q96PV0 1343 aa15.7■□□□□ 0.1
MSH5-201ENST00000375703 TULP1O00294 542 aaPredicted RBP15.69■□□□□ 0.1
MSH5-201ENST00000375703 KIAA0391O15091 583 aaKnown RBP15.69■□□□□ 0.1
MSH5-201ENST00000375703 P4HA2O15460 535 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 CAND2O75155 1236 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 P4HBP07237 508 aaKnown RBP15.69■□□□□ 0.1
MSH5-201ENST00000375703 MESDQ14696 234 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 ZNF746Q6NUN9 644 aaPredicted RBP15.69■□□□□ 0.1
MSH5-201ENST00000375703 HOOK3Q86VS8 718 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 NEK9Q8TD19 979 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 CBWD1Q9BRT8 395 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 PABPC3Q9H361 631 aaKnown RBP15.69■□□□□ 0.1
MSH5-201ENST00000375703 EP400Q96L91 3159 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 PHF2O75151 1096 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 SHBGP04278 402 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 PAEPP09466 180 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 HSPA6P17066 643 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 CHRNA3P32297 505 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 PTGIRP43119 386 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 CDR1P51861 262 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 QPCTQ16769 361 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 EPC2Q52LR7 807 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 FBXO25Q8TCJ0 367 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 TLCD1Q96CP7 247 aa15.69■□□□□ 0.1
MSH5-201ENST00000375703 CNOT10Q9H9A5 744 aaKnown RBP15.69■□□□□ 0.1
MSH5-201ENST00000375703 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.69■□□□□ 0.1
MSH5-201ENST00000375703 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
MSH5-201ENST00000375703 CLRN2A0PK11 232 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 SGPL1O95470 568 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 MAPTP10636 758 aaKnown RBP15.68■□□□□ 0.1
MSH5-201ENST00000375703 ITGB5P18084 799 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 COMTP21964 271 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 ALCAMQ13740 583 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 TCEAL1Q15170 157 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 MSL1Q68DK7 614 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 CCDC121Q6ZUS5 278 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 KRT27Q7Z3Y8 459 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 PRELID2Q8N945 189 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 XXYLT1Q8NBI6 393 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 CABS1Q96KC9 395 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 ZSWIM1Q9BR11 485 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 VCPKMTQ9H867 229 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 KCNH7Q9NS40 1196 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 ZBTB21Q9ULJ3 1066 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 SCN9AQ15858 1988 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 PODXLO00592 558 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 BACH1O14867 736 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 MARCKSL1P49006 195 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 ACTN3Q08043 901 aaPredicted RBP15.68■□□□□ 0.1
MSH5-201ENST00000375703 BYSLQ13895 437 aaKnown RBP15.68■□□□□ 0.1
MSH5-201ENST00000375703 C1orf220Q5T0J3 134 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 DENND2CQ68D51 928 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 ZDHHC24Q6UX98 284 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 FAM160B2Q86V87 743 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 MDM1Q8TC05 714 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 PCDHB18PQ96TA0 734 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 EPB41L4BQ9H329 900 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
MSH5-201ENST00000375703 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.68■□□□□ 0.19e-7■■■■■ 47
MSH5-201ENST00000375703 FBXO28Q9NVF7 368 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 HSPBP1Q9NZL4 362 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 PNMA2Q9UL42 364 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 ZHX2Q9Y6X8 837 aa15.68■□□□□ 0.1
MSH5-201ENST00000375703 TLDC2A0PJX2 215 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 NUDT17P0C025 328 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 PLS3P13797 630 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 TNIP1Q15025 636 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 SEL1L2Q5TEA6 688 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 CPLX4Q7Z7G2 160 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 ZSWIM2Q8NEG5 633 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 KAT5Q92993 513 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 RNF25Q96BH1 459 aaPredicted RBP15.67■□□□□ 0.1
MSH5-201ENST00000375703 SEC16BQ96JE7 1060 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 PCYOX1Q9UHG3 505 aa15.67■□□□□ 0.1
MSH5-201ENST00000375703 CTNNA2P26232 953 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms