RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 PLCG1P19174 1290 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 MAPK7Q13164 816 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 MAPK6Q16659 721 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 FAM187BQ17R55 369 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 SPECC1Q5M775 1068 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 USP49Q70CQ1 688 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.04■■□□□ 1.44
NINJ1-201ENST00000375446 KLHL23Q8NBE8 558 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 RSPH1Q8WYR4 309 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 EPSTI1Q96J88 318 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 CLIC6Q96NY7 704 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 KIFC3Q9BVG8 833 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 EIF2AQ9BY44 585 aaKnown RBP24.04■■□□□ 1.44
NINJ1-201ENST00000375446 MRPL9Q9BYD2 267 aaKnown RBP24.04■■□□□ 1.44
NINJ1-201ENST00000375446 LMAN2LQ9H0V9 348 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 PCDHB12Q9Y5F1 795 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 RALGAPA2Q2PPJ7 1873 aa24.04■■□□□ 1.44
NINJ1-201ENST00000375446 F13A1P00488 732 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 ITGB1P05556 798 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 LAG3P18627 525 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 NCLP19338 710 aaKnown RBP24.03■■□□□ 1.44
NINJ1-201ENST00000375446 EFNA5P52803 228 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 AGMOQ6ZNB7 445 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 COLGALT1Q8NBJ5 622 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 CNNM3Q8NE01 707 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 LRRC15Q8TF66 581 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 CCDC113Q9H0I3 377 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 ALG13Q9NP73 1137 aaKnown RBP24.03■■□□□ 1.44
NINJ1-201ENST00000375446 PRDM6Q9NQX0 595 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 KCND2Q9NZV8 630 aa24.03■■□□□ 1.44
NINJ1-201ENST00000375446 TFIP11Q9UBB9 837 aaKnown RBP24.03■■□□□ 1.44
NINJ1-201ENST00000375446 A0A1B0GUA9 196 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 CCDC169A6NNP5 214 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 OFD1O75665 1012 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 PRKCBP05771 671 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 LIG1P18858 919 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 NPTX2P47972 431 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 PEX3P56589 373 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 RAD51AP2Q09MP3 1159 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 DMP1Q13316 513 aaPredicted RBP24.02■■□□□ 1.44
NINJ1-201ENST00000375446 PKP1Q13835 747 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 STK38Q15208 465 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 SKIV2LQ15477 1246 aaKnown RBP24.02■■□□□ 1.44
NINJ1-201ENST00000375446 NOMO2Q5JPE7 1267 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 KRI1Q8N9T8 703 aaKnown RBP24.02■■□□□ 1.44
NINJ1-201ENST00000375446 LINC00301Q8NCQ3 95 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 SMG8Q8ND04 991 aaKnown RBP24.02■■□□□ 1.44
NINJ1-201ENST00000375446 SYMPKQ92797 1274 aaKnown RBP24.02■■□□□ 1.44
NINJ1-201ENST00000375446 BLOC1S4Q9NUP1 217 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 INPP5FQ9Y2H2 1132 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 IPPQ9Y573 584 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 CNTNAP2Q9UHC6 1331 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 FNDC1Q4ZHG4 1894 aaPredicted RBP24.02■■□□□ 1.44
NINJ1-201ENST00000375446 NLRC5Q86WI3 1866 aa24.02■■□□□ 1.44
NINJ1-201ENST00000375446 ACKR2O00590 384 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 PRPF4BQ13523 1007 aaKnown RBP24.01■■□□□ 1.43
NINJ1-201ENST00000375446 CSPP1Q1MSJ5 1256 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 TIGD5Q53EQ6 642 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 SLC27A1Q6PCB7 646 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 CDR2LQ86X02 465 aaPredicted RBP24.01■■□□□ 1.43
NINJ1-201ENST00000375446 SPPL3Q8TCT6 385 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 RAD54LQ92698 747 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 TRIM6Q9C030 488 aaPredicted RBP24.01■■□□□ 1.43
NINJ1-201ENST00000375446 RSAD1Q9HA92 442 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 C17orf75Q9HAS0 396 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 PRUNE2Q8WUY3 3088 aa24.01■■□□□ 1.43
NINJ1-201ENST00000375446 TTLL13PA6NNM8 815 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 SFI1A8K8P3 1242 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 ITGA4P13612 1032 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 TXLNAP40222 546 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 DHX8Q14562 1220 aaKnown RBP24■■□□□ 1.43
NINJ1-201ENST00000375446 TMEM132AQ24JP5 1023 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 FOXD4L6Q3SYB3 417 aaPredicted RBP24■■□□□ 1.43
NINJ1-201ENST00000375446 ARSHQ5FYA8 562 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 KCNT2Q6UVM3 1135 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 FOXD4L3Q6VB84 417 aaPredicted RBP24■■□□□ 1.43
NINJ1-201ENST00000375446 GPBP1Q86WP2 473 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 THNSL1Q8IYQ7 743 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 ZNF558Q96NG5 402 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 UBN1Q9NPG3 1134 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 CCDC39Q9UFE4 941 aa24■■□□□ 1.43
NINJ1-201ENST00000375446 NPHP3-ACAD11A0A0J9YXS1 232 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 K7ERI5 159 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 SPTLC2O15270 562 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 FGF18O76093 207 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 NPTXRO95502 500 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 YEATS4O95619 227 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 MCM6Q14566 821 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 HACE1Q8IYU2 909 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 URGCPQ8TCY9 931 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 RNF39Q9H2S5 420 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 NXF3Q9H4D5 531 aaKnown RBP23.99■■□□□ 1.43
NINJ1-201ENST00000375446 KMT5AQ9NQR1 393 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 TBC1D13Q9NVG8 400 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 ARHGAP28Q9P2N2 729 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 USP20Q9Y2K6 914 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 RBM19Q9Y4C8 960 aaKnown RBP23.99■■□□□ 1.43
NINJ1-201ENST00000375446 HES2Q9Y543 173 aa23.99■■□□□ 1.43
NINJ1-201ENST00000375446 N4BP3O15049 544 aa23.98■■□□□ 1.43
NINJ1-201ENST00000375446 EDN1P05305 212 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms