RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 TTC4O95801 387 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 CALB1P05937 261 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 STX1BP61266 288 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 RNF169Q8NCN4 708 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 FBXL13Q8NEE6 735 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 APOL6Q9BWW8 343 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 TDRD3Q9H7E2 651 aaKnown RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 MID2Q9UJV3 735 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ARL2BPQ9Y2Y0 163 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 DUSP10Q9Y6W6 482 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 CFLARO15519 480 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 CLDN3O15551 220 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 CDH16O75309 829 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 PDHA1P08559 390 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ARFIP2P53365 341 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 KCTD2Q14681 263 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 AGBL2Q5U5Z8 902 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 HAUS6Q7Z4H7 955 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ZBED8Q8IZ13 594 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 DEPDC1BQ8WUY9 529 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 HEXIM2Q96MH2 286 aaKnown RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 NCAPGQ9BPX3 1015 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF341Q9BYN7 854 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 YIPF3Q9GZM5 350 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ISCUQ9H1K1 167 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 EHD2Q9NZN4 543 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 APEX2Q9UBZ4 518 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 GGT7Q9UJ14 662 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 MAGED2Q9UNF1 606 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SLC16A3O15427 465 aaKnown RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 NPR1P16066 1061 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 IFRD2Q12894 506 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 PDIA2Q13087 525 aaKnown RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 STAT4Q14765 748 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ANKRD20A4Q4UJ75 823 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ANKRD20A8PQ5CZ79 823 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ANKRD20A2Q5SQ80 823 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ANKRD20A1Q5TYW2 823 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 RSRC2Q7L4I2 434 aaKnown RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SEC16BQ96JE7 1060 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SERPINI1Q99574 410 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 PRMT1Q99873 361 aaKnown RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 GOLPH3Q9H4A6 298 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 DMGDHQ9UI17 866 aaKnown RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 RTN2O75298 545 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SPAG7O75391 227 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ZNF18P17022 549 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SCP2P22307 547 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ESRRGP62508 458 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 KRT76Q01546 638 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ENOSF1Q7L5Y1 443 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 MARCH10Q8NA82 808 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-203ENST00000375274 ATL2Q8NHH9 583 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 SPDL1Q96EA4 605 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 CYFIP2Q96F07 1278 aa12.3□□□□□ -0.44
PTCH1-203ENST00000375274 CYP26A1O43174 497 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 FMO5P49326 533 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 MDM2Q00987 491 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-203ENST00000375274 ART3Q13508 389 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 SF3B3Q15393 1217 aaKnown RBP12.29□□□□□ -0.44
PTCH1-203ENST00000375274 CDKAL1Q5VV42 579 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 KRT80Q6KB66 452 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 ST13P4Q8IZP2 240 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PDZD8Q8NEN9 1154 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 NUDCD1Q96RS6 583 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 REEP2Q9BRK0 252 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 CAPN6Q9Y6Q1 641 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PLEKHG2Q9H7P9 1386 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 NRXN1Q9ULB1 1477 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 ABCB11O95342 1321 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 H3BQF6 201 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PPFIA2O75334 1257 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 ZWINTO95229 277 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 RAD23BP54727 409 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 NTRK3Q16288 839 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PAPD7Q5XG87 772 aaKnown RBP12.29□□□□□ -0.44
PTCH1-203ENST00000375274 EEPD1Q7L9B9 569 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PPM1NQ8N819 430 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 ATP11CQ8NB49 1132 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 RPF1Q9H9Y2 349 aaKnown RBP12.29□□□□□ -0.44
PTCH1-203ENST00000375274 SENP1Q9P0U3 644 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 APOBEC2Q9Y235 224 aaKnown RBP12.29□□□□□ -0.44
PTCH1-203ENST00000375274 ADGRB1O14514 1584 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 SRGAP2BP0DMP2 458 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 GNA15P30679 374 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 EPHA7Q15375 998 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 PIP4K2CQ8TBX8 421 aa12.29□□□□□ -0.44
PTCH1-203ENST00000375274 SDCCAG3Q96C92 435 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms