RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 PPP3CAQ08209 521 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
HDAC8-209ENST00000373589 RAPGEF1Q13905 1077 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 MORN1Q5T089 497 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 IER5Q5VY09 327 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 LMO3Q8TAP4 145 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 NPLOC4Q8TAT6 608 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 POMGNT1Q8WZA1 660 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 SAAL1Q96ER3 474 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 TMEM134Q9H6X4 195 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 MYO1AQ9UBC5 1043 aa17.1■□□□□ 0.33
HDAC8-209ENST00000373589 AJAP1Q9UKB5 411 aaPredicted RBP17.1■□□□□ 0.33
HDAC8-209ENST00000373589 LRRIQ4A6NIV6 560 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 ADCY3O60266 1144 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 HBP1O60381 514 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
HDAC8-209ENST00000373589 SLC10A3P09131 477 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 CASQ1P31415 396 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 ENPEPQ07075 957 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 STRN3Q13033 797 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-209ENST00000373589 IQCEQ6IPM2 695 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 IRF2BP2Q7Z5L9 587 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
HDAC8-209ENST00000373589 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
HDAC8-209ENST00000373589 MFSD14AQ96MC6 490 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 SPAG5Q96R06 1193 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 INTS2Q9H0H0 1204 aaKnown RBP17.09■□□□□ 0.33
HDAC8-209ENST00000373589 ERAP1Q9NZ08 941 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 DAAM1Q9Y4D1 1078 aa17.09■□□□□ 0.33
HDAC8-209ENST00000373589 SIP14410 1827 aa17.08■□□□□ 0.33
HDAC8-209ENST00000373589 RCCD1A6NED2 376 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 RBAK-RBAKDNI3L0D1 243 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 K7ERI5 159 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 CTIFO43310 598 aaKnown RBP17.08■□□□□ 0.32
HDAC8-209ENST00000373589 AKR1B10O60218 316 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 VAV2P52735 878 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 SPA17Q15506 151 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 ASIC2Q16515 512 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 GJB7Q6PEY0 223 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 C17orf99Q6UX52 265 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 IFNL1Q8IU54 200 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 GPIHBP1Q8IV16 184 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 TMC2Q8TDI7 906 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 PARD3BQ8TEW8 1205 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 TCP11Q8WWU5 503 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 BICD1Q96G01 975 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
HDAC8-209ENST00000373589 ABHD16BQ9H3Z7 469 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 DEF6Q9H4E7 631 aa17.08■□□□□ 0.32
HDAC8-209ENST00000373589 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.07■□□□□ 0.32
HDAC8-209ENST00000373589 LGALS2P05162 132 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 LIG4P49917 911 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 INHBEP58166 350 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 ACVR2BQ13705 512 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 MXD4Q14582 209 aaPredicted RBP17.07■□□□□ 0.32
HDAC8-209ENST00000373589 DUSP28Q4G0W2 176 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 EPC2Q52LR7 807 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
HDAC8-209ENST00000373589 KIAA1328Q86T90 577 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 GPD1LQ8N335 351 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 AFG1LQ8WV93 481 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 LACRTQ9GZZ8 138 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 RNPEPQ9H4A4 650 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 SLC5A4Q9NY91 659 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 TRIM10Q9UDY6 481 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 TFR2Q9UP52 801 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 TRPC6Q9Y210 931 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 USP20Q9Y2K6 914 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 KIAA0391O15091 583 aaKnown RBP17.07■□□□□ 0.32
HDAC8-209ENST00000373589 SMPD1P17405 629 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 PRKCIP41743 596 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 GCLMP48507 274 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 CYP24A1Q07973 514 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 KLHL30Q0D2K2 578 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 MAP2K5Q13163 448 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 ZNF569Q5MCW4 686 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 CCDC122Q5T0U0 273 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 CDCA2Q69YH5 1023 aaPredicted RBP17.07■□□□□ 0.32
HDAC8-209ENST00000373589 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
HDAC8-209ENST00000373589 JAKMIP2Q96AA8 810 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 STK33Q9BYT3 514 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 TMEM117Q9H0C3 514 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 SUGCTQ9HAC7 445 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 APEX2Q9UBZ4 518 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 PCDHA13Q9Y5I0 950 aa17.07■□□□□ 0.32
HDAC8-209ENST00000373589 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
HDAC8-209ENST00000373589 LRRIQ3A6PVS8 624 aaPredicted RBP17.06■□□□□ 0.32
HDAC8-209ENST00000373589 FAM155AB1AL88 458 aaPredicted RBP17.06■□□□□ 0.32
HDAC8-209ENST00000373589 DYNC1I1O14576 645 aa17.06■□□□□ 0.32
HDAC8-209ENST00000373589 KRT86O43790 486 aa17.06■□□□□ 0.32
HDAC8-209ENST00000373589 EXTL3O43909 919 aa17.06■□□□□ 0.32
HDAC8-209ENST00000373589 PPFIA4O75335 1185 aa17.06■□□□□ 0.32
HDAC8-209ENST00000373589 EDN1P05305 212 aa17.06■□□□□ 0.32
HDAC8-209ENST00000373589 HOXC6P09630 235 aa17.06■□□□□ 0.32
HDAC8-209ENST00000373589 HOXD8P13378 290 aaPredicted RBP17.06■□□□□ 0.32
HDAC8-209ENST00000373589 RFX1P22670 979 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms