RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TSG101Q99816 390 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 DDX50Q9BQ39 737 aaKnown RBP5.85□□□□□ -1.47
ATG4A-204ENST00000372246 SYT15Q9BQS2 421 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 SH2D3AQ9BRG2 576 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 TXLNGYQ9BZA5 131 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 CRNKL1Q9BZJ0 848 aaKnown RBP5.85□□□□□ -1.47
ATG4A-204ENST00000372246 SRP68Q9UHB9 627 aaKnown RBP5.85□□□□□ -1.47
ATG4A-204ENST00000372246 INTUQ9ULD6 942 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 STXBP5LQ9Y2K9 1186 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 DAAM1Q9Y4D1 1078 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 PFASO15067 1338 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 AFF2P51816 1311 aa5.85□□□□□ -1.47
ATG4A-204ENST00000372246 CENPFP49454 3210 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ALS2Q96Q42 1657 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PPFIA2O75334 1257 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 MED24O75448 989 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 FGRP09769 529 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 GYS1P13807 737 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 RASA1P20936 1047 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 SSTR3P32745 418 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 IL6STP40189 918 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 MSH2P43246 934 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 GCGRP47871 477 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 CTCFP49711 727 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PPP2R5BQ15173 497 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 CCDC152Q4G0S7 254 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 CAVIN4Q5BKX8 364 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ZC3H12AQ5D1E8 599 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 KRT79Q5XKE5 535 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 DUPD1Q68J44 220 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ANO7Q6IWH7 933 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 RFWD3Q6PCD5 774 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 VSTM1Q6UX27 236 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 SFR1Q86XK3 245 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 FMNL3Q8IVF7 1028 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 TAB3Q8N5C8 712 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ANKS4BQ8N8V4 417 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ZSWIM2Q8NEG5 633 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 NEK9Q8TD19 979 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 TBC1D22AQ8WUA7 517 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 KAT5Q92993 513 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PYM1Q9BRP8 204 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ERP44Q9BS26 406 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 KCTD10Q9H3F6 313 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ETNK1Q9HBU6 452 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 SIX2Q9NPC8 291 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 GCNT4Q9P109 453 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 TRPM3Q9HCF6 1732 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PALM3A6NDB9 673 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 C2orf71A6NGG8 1288 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 FAM196BA6NMK8 535 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 A6NNZ2 444 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 NTSR2O95665 410 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 H2AFZP0C0S5 128 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 DLATP10515 647 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 GNAT1P11488 350 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ATP4AP20648 1035 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 EPHB2P29323 1055 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 FOXN2P32314 431 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 CRKLP46109 303 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 RBM5P52756 815 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 LRRC63Q05C16 580 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 USP4Q13107 963 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ZNF268Q14587 947 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 MESDQ14696 234 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 KYNUQ16719 465 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PUS10Q3MIT2 529 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 TUBB8Q3ZCM7 444 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 C12orf60Q5U649 245 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 KCTD1Q719H9 257 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 H2AFVQ71UI9 128 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ECHDC2Q86YB7 292 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 DZIP1Q86YF9 867 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 SULF1Q8IWU6 871 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 SRRM1Q8IYB3 904 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ZNF444Q8N0Y2 327 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ZNF513Q8N8E2 541 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 MAB21L3Q8N8X9 362 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PRELID2Q8N945 189 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 C3orf20Q8ND61 904 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 RUBCNQ92622 972 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 RPGRQ92834 1020 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 HOOK2Q96ED9 719 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 RPS6KC1Q96S38 1066 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 P2RX7Q99572 595 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 RUSC1Q9BVN2 902 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 TMUB1Q9BVT8 246 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PABPC3Q9H361 631 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 ALG13Q9NP73 1137 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 NOP53Q9NZM5 478 aaKnown RBP5.84□□□□□ -1.47
ATG4A-204ENST00000372246 AIPL1Q9NZN9 384 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 GGA2Q9UJY4 613 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PCDHA2Q9Y5H9 948 aa5.84□□□□□ -1.47
ATG4A-204ENST00000372246 PHRF1Q9P1Y6 1649 aaKnown RBP5.84□□□□□ -1.48
ATG4A-204ENST00000372246 CACNA1SQ13698 1873 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 O00370 1275 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 RASGRF2O14827 1237 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 RIPK2O43353 540 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 COQ9O75208 318 aa5.83□□□□□ -1.48
ATG4A-204ENST00000372246 PYGLP06737 847 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms