RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
LRRC40-201ENST00000370952 TEKT4Q8WW24 435 aa10.39□□□□□ -0.75
LRRC40-201ENST00000370952 PWWP2AQ96N64 755 aa10.39□□□□□ -0.75
LRRC40-201ENST00000370952 NUDCD1Q96RS6 583 aa10.39□□□□□ -0.75
LRRC40-201ENST00000370952 CTTNBP2NLQ9P2B4 639 aa10.39□□□□□ -0.75
LRRC40-201ENST00000370952 DNAJC12Q9UKB3 198 aa10.39□□□□□ -0.75
LRRC40-201ENST00000370952 DIS3Q9Y2L1 958 aaKnown RBP10.39□□□□□ -0.75
LRRC40-201ENST00000370952 ARFGEF1Q9Y6D6 1849 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 ESYT2A0FGR8 921 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 LMNB1P20700 586 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 TNFAIP3P21580 790 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 CALB2P22676 271 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 FOXN2P32314 431 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 CDK8P49336 464 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 SESN3P58005 492 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 MESDQ14696 234 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 KYNUQ16719 465 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 FAM43BQ6ZT52 329 aaPredicted RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 LONP2Q86WA8 852 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 SRRM1Q8IYB3 904 aaKnown RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 FAM13CQ8NE31 585 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 RPS6KC1Q96S38 1066 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 REEP2Q9BRK0 252 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 NT5C3AQ9H0P0 336 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 DHX36Q9H2U1 1008 aaKnown RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 AAASQ9NRG9 546 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 BCL9O00512 1426 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 SFI1A8K8P3 1242 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 PODXLO00592 558 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 ATMINO43313 823 aaPredicted RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 ENTPD5O75356 428 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 TPBGLP0DKB5 382 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 PYGMP11217 842 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 CRKLP46109 303 aaKnown RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 TRIP13Q15645 432 aaPredicted RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 CWF19L1Q69YN2 538 aaKnown RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 ZNF746Q6NUN9 644 aaPredicted RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 TMEM154Q6P9G4 183 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 PIGOQ8TEQ8 1089 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 ART4Q93070 314 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 RAB3IPQ96QF0 476 aaPredicted RBP10.38□□□□□ -0.75
LRRC40-201ENST00000370952 PARP2Q9UGN5 583 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 PCYOX1Q9UHG3 505 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 TRAF3IP3Q9Y228 551 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 LRRC42Q9Y546 428 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 SNED1Q8TER0 1413 aa10.38□□□□□ -0.75
LRRC40-201ENST00000370952 ASTN1O14525 1302 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 SYNGAP1Q96PV0 1343 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 KDM3AQ9Y4C1 1321 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 CETPP11597 493 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 ANXA13P27216 316 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 EPHB2P29323 1055 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 HOXA7P31268 230 aaPredicted RBP10.37□□□□□ -0.75
LRRC40-201ENST00000370952 COILP38432 576 aaPredicted RBP10.37□□□□□ -0.75
LRRC40-201ENST00000370952 RFC5P40937 340 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 SLC12A3P55017 1021 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 GIT2Q14161 759 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 RNF220Q5VTB9 566 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 PRUNE1Q86TP1 453 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 TEX9Q8N6V9 391 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 STK32AQ8WU08 396 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 SLC20A1Q8WUM9 679 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 BTBD6Q96KE9 485 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 PITPNM3Q9BZ71 974 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 CCDC87Q9NVE4 849 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.37□□□□□ -0.75
LRRC40-201ENST00000370952 CYP39A1Q9NYL5 469 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 C2CD2Q9Y426 696 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 CALUO43852 315 aaPredicted RBP10.37□□□□□ -0.75
LRRC40-201ENST00000370952 WFS1O76024 890 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 GCNT3O95395 438 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 TAC1P20366 129 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 CTNNA2P26232 953 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 PEX5P50542 639 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 RPS6KA3P51812 740 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 CALCOCO2Q13137 446 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 SEL1L2Q5TEA6 688 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 ARMC3Q5W041 872 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 RNF43Q68DV7 783 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 UCMAQ8WVF2 138 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 RUNDC3BQ96NL0 473 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 ZSWIM1Q9BR11 485 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 MOV10L1Q9BXT6 1211 aaKnown RBP10.37□□□□□ -0.75
LRRC40-201ENST00000370952 ROPN1BQ9BZX4 212 aaPredicted RBP10.37□□□□□ -0.75
LRRC40-201ENST00000370952 KIAA1683Q9H0B3 1180 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 TAOK3Q9H2K8 898 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 RIOX1Q9H6W3 641 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 ROPN1Q9HAT0 212 aaPredicted RBP10.37□□□□□ -0.75
LRRC40-201ENST00000370952 TXLNGQ9NUQ3 528 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 DLGAP2Q9P1A6 1054 aa10.37□□□□□ -0.75
LRRC40-201ENST00000370952 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CBX6O95503 412 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 ALAS1P13196 640 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 ATP6V1C1P21283 382 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 COMTP21964 271 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 PTDSS1P48651 473 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms